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Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/35635
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4111 A_BomoFB_comp10550_c2_seq35
5255bp
 putative_conserved_plasma_membrane_protein_[Operophtera_brumata]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
FPKM:1.50 TPM:1.65
4112 A_BomoFB_comp10550_c2_seq36
1871bp
 PREDICTED:_ADP-ribosylation_factor-like_protein_1_[Papilio_xuthus]
GO:0000042 P protein localization to Golgi apparatus
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0007030 P Golgi organization
GO:0007264 P small GTPase mediated signal transduction
GO:0007269 P neurotransmitter secretion
GO:0007431 P salivary gland development
GO:0015031 P protein transport
GO:0016197 P endosomal transport
GO:0019904 F protein domain specific binding
GO:0030334 P regulation of cell migration
GO:0033227 P dsRNA transport
GO:0033363 P secretory granule organization
GO:0034067 P protein localization to Golgi apparatus
GO:0035220 P wing disc development
GO:0048488 P synaptic vesicle endocytosis
GO:0060628 P regulation of ER to Golgi vesicle-mediated transport
GO:0070861 P regulation of protein exit from endoplasmic reticulum
GO:0090158 P endoplasmic reticulum membrane organization
GO:0098793 C presynapse
FPKM:12.83 TPM:14.06
4113 A_BomoFB_comp10550_c2_seq37
337bp
FPKM:0.56 TPM:0.61
4114 A_BomoFB_comp10550_c2_seq38
5385bp
 putative_conserved_plasma_membrane_protein_[Operophtera_brumata]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
FPKM:3.99 TPM:4.38
4115 A_BomoFB_comp10550_c2_seq39
1524bp
 hypothetical_protein_IscW_ISCW004298_[Ixodes_scapularis]
FPKM:4.78 TPM:5.24
4116 A_BomoFB_comp10550_c2_seq4
921bp
 PREDICTED:_zinc_finger_protein_845-like_[Bombyx_mori]
FPKM:2.86 TPM:3.13
4117 A_BomoFB_comp10550_c2_seq40
349bp
FPKM:1.54 TPM:1.69
4118 A_BomoFB_comp10550_c2_seq41
278bp
FPKM:0.00 TPM:0.00
4119 A_BomoFB_comp10550_c2_seq42
746bp
 putative_pol-like_protein_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
4120 A_BomoFB_comp10550_c2_seq43
5329bp
 putative_conserved_plasma_membrane_protein_[Operophtera_brumata]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
FPKM:0.00 TPM:0.00
4121 A_BomoFB_comp10550_c2_seq44
362bp
FPKM:1.51 TPM:1.66
4122 A_BomoFB_comp10550_c2_seq45
812bp
 PREDICTED:_zinc_finger_protein_845-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4123 A_BomoFB_comp10550_c2_seq46
5278bp
 putative_conserved_plasma_membrane_protein_[Operophtera_brumata]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
FPKM:1.75 TPM:1.92
4124 A_BomoFB_comp10550_c2_seq47
612bp
FPKM:0.00 TPM:0.00
4125 A_BomoFB_comp10550_c2_seq48
1611bp
 PREDICTED:_ADP-ribosylation_factor-like_protein_1_[Papilio_xuthus]
GO:0000042 P protein localization to Golgi apparatus
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0007030 P Golgi organization
GO:0007264 P small GTPase mediated signal transduction
GO:0007269 P neurotransmitter secretion
GO:0007431 P salivary gland development
GO:0015031 P protein transport
GO:0016197 P endosomal transport
GO:0019904 F protein domain specific binding
GO:0030334 P regulation of cell migration
GO:0033227 P dsRNA transport
GO:0033363 P secretory granule organization
GO:0034067 P protein localization to Golgi apparatus
GO:0035220 P wing disc development
GO:0048488 P synaptic vesicle endocytosis
GO:0060628 P regulation of ER to Golgi vesicle-mediated transport
GO:0070861 P regulation of protein exit from endoplasmic reticulum
GO:0090158 P endoplasmic reticulum membrane organization
GO:0098793 C presynapse
FPKM:0.00 TPM:0.00
4126 A_BomoFB_comp10550_c2_seq49
5459bp
 putative_conserved_plasma_membrane_protein_[Operophtera_brumata]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
FPKM:0.06 TPM:0.07
4127 A_BomoFB_comp10550_c2_seq5
1146bp
 PREDICTED:_zinc_finger_protein_845-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4128 A_BomoFB_comp10550_c2_seq6
690bp
FPKM:0.30 TPM:0.33
4129 A_BomoFB_comp10550_c2_seq7
3208bp
 PREDICTED:_translation_initiation_factor_eIF-2B_subunit_delta_[Bombyx_mori]
GO:0001541 P ovarian follicle development
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0014003 P oligodendrocyte development
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0042552 P myelination
GO:0043547 P positive regulation of GTPase activity
GO:0044237 P cellular metabolic process
GO:0045947 P negative regulation of translational initiation
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
GO:0051716 P cellular response to stimulus
FPKM:0.38 TPM:0.41
4130 A_BomoFB_comp10550_c2_seq8
5364bp
 putative_conserved_plasma_membrane_protein_[Operophtera_brumata]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
FPKM:0.33 TPM:0.37
4131 A_BomoFB_comp10550_c2_seq9
5462bp
 putative_conserved_plasma_membrane_protein_[Operophtera_brumata]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
FPKM:0.00 TPM:0.00
4132 A_BomoFB_comp10550_c3_seq1
401bp
FPKM:1.24 TPM:1.36
4133 A_BomoFB_comp105515_c0_seq1
773bp
 ferredoxin--NAD(+)_reductase_[Curvibacter_sp._PAE-UM]
FPKM:1.10 TPM:1.21
4134 A_BomoFB_comp10551_c0_seq1
417bp
 PREDICTED:_fatty_acid_synthase-like_[Bombyx_mori]
FPKM:3.01 TPM:3.30
4135 A_BomoFB_comp10551_c0_seq2
926bp
 PREDICTED:_fatty_acid_synthase-like_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0003824 F catalytic activity
GO:0004312 F fatty acid synthase activity
GO:0004313 F [acyl-carrier-protein] S-acetyltransferase activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0004315 F 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0004317 F 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
GO:0004319 F enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity
GO:0004320 F oleoyl-[acyl-carrier-protein] hydrolase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008144 F obsolete drug binding
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0015939 P pantothenate metabolic process
GO:0016020 C membrane
GO:0016295 F myristoyl-[acyl-carrier-protein] hydrolase activity
GO:0016296 F palmitoyl-[acyl-carrier-protein] hydrolase activity
GO:0016297 F acyl-[acyl-carrier-protein] hydrolase activity
GO:0016491 F oxidoreductase activity
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016829 F lyase activity
GO:0019171 F 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
GO:0030879 P mammary gland development
GO:0031177 F phosphopantetheine binding
GO:0031325 P positive regulation of cellular metabolic process
GO:0035338 P long-chain fatty-acyl-CoA biosynthetic process
GO:0042470 C melanosome
GO:0042587 C glycogen granule
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0047117 F enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity
GO:0047451 F 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
GO:0071353 P cellular response to interleukin-4
FPKM:8.18 TPM:8.97
4136 A_BomoFB_comp10551_c0_seq3
5294bp
 PREDICTED:_fatty_acid_synthase-like_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0003824 F catalytic activity
GO:0004312 F fatty acid synthase activity
GO:0004313 F [acyl-carrier-protein] S-acetyltransferase activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0004315 F 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0004317 F 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
GO:0004319 F enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity
GO:0004320 F oleoyl-[acyl-carrier-protein] hydrolase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008144 F obsolete drug binding
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0015939 P pantothenate metabolic process
GO:0016020 C membrane
GO:0016295 F myristoyl-[acyl-carrier-protein] hydrolase activity
GO:0016296 F palmitoyl-[acyl-carrier-protein] hydrolase activity
GO:0016297 F acyl-[acyl-carrier-protein] hydrolase activity
GO:0016491 F oxidoreductase activity
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016829 F lyase activity
GO:0019171 F 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
GO:0030879 P mammary gland development
GO:0031177 F phosphopantetheine binding
GO:0031325 P positive regulation of cellular metabolic process
GO:0035338 P long-chain fatty-acyl-CoA biosynthetic process
GO:0042470 C melanosome
GO:0042587 C glycogen granule
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0047117 F enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity
GO:0047451 F 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
GO:0071353 P cellular response to interleukin-4
FPKM:6.39 TPM:7.01
4137 A_BomoFB_comp105521_c0_seq1
324bp
 Fanconi-associated_nuclease_1_[Papilio_xuthus]
GO:0004518 F nuclease activity
GO:0004528 F phosphodiesterase I activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:4.21 TPM:4.61
4138 A_BomoFB_comp10552_c0_seq1
753bp
 olfactory_receptor_[Bombyx_mori]
FPKM:2.48 TPM:2.71
4139 A_BomoFB_comp10552_c1_seq1
616bp
FPKM:1.88 TPM:2.06
4140 A_BomoFB_comp10552_c2_seq1
1711bp
 PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
FPKM:0.00 TPM:0.00
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