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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4081 A_BomoFB_comp10550_c0_seq1
491bp
 AF499461_1_reverse_transcriptase,_partial_[Candida_dubliniensis]
FPKM:1.76 TPM:1.93
4082 A_BomoFB_comp10550_c1_seq1
846bp
FPKM:2.29 TPM:2.51
4083 A_BomoFB_comp10550_c2_seq1
1598bp
 hypothetical_protein_IscW_ISCW004298_[Ixodes_scapularis]
FPKM:0.00 TPM:0.00
4084 A_BomoFB_comp10550_c2_seq10
4838bp
 putative_conserved_plasma_membrane_protein_[Operophtera_brumata]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
FPKM:5.69 TPM:6.24
4085 A_BomoFB_comp10550_c2_seq11
288bp
FPKM:0.00 TPM:0.00
4086 A_BomoFB_comp10550_c2_seq12
2356bp
 PREDICTED:_translation_initiation_factor_eIF-2B_subunit_delta_[Bombyx_mori]
GO:0001541 P ovarian follicle development
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0014003 P oligodendrocyte development
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0042552 P myelination
GO:0043547 P positive regulation of GTPase activity
GO:0044237 P cellular metabolic process
GO:0045947 P negative regulation of translational initiation
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
GO:0051716 P cellular response to stimulus
FPKM:0.00 TPM:0.00
4087 A_BomoFB_comp10550_c2_seq13
1537bp
 PREDICTED:_ADP-ribosylation_factor-like_protein_1_[Papilio_xuthus]
GO:0000042 P protein localization to Golgi apparatus
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0007030 P Golgi organization
GO:0007264 P small GTPase mediated signal transduction
GO:0007269 P neurotransmitter secretion
GO:0007431 P salivary gland development
GO:0015031 P protein transport
GO:0016197 P endosomal transport
GO:0019904 F protein domain specific binding
GO:0030334 P regulation of cell migration
GO:0033227 P dsRNA transport
GO:0033363 P secretory granule organization
GO:0034067 P protein localization to Golgi apparatus
GO:0035220 P wing disc development
GO:0048488 P synaptic vesicle endocytosis
GO:0060628 P regulation of ER to Golgi vesicle-mediated transport
GO:0070861 P regulation of protein exit from endoplasmic reticulum
GO:0090158 P endoplasmic reticulum membrane organization
GO:0098793 C presynapse
FPKM:0.00 TPM:0.00
4088 A_BomoFB_comp10550_c2_seq14
2496bp
 PREDICTED:_translation_initiation_factor_eIF-2B_subunit_delta_[Bombyx_mori]
GO:0001541 P ovarian follicle development
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0014003 P oligodendrocyte development
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0042552 P myelination
GO:0043547 P positive regulation of GTPase activity
GO:0044237 P cellular metabolic process
GO:0045947 P negative regulation of translational initiation
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
GO:0051716 P cellular response to stimulus
FPKM:0.00 TPM:0.00
4089 A_BomoFB_comp10550_c2_seq15
5589bp
 putative_conserved_plasma_membrane_protein_[Operophtera_brumata]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
FPKM:0.00 TPM:0.00
4090 A_BomoFB_comp10550_c2_seq16
634bp
FPKM:0.00 TPM:0.00
4091 A_BomoFB_comp10550_c2_seq17
300bp
 patatin_[Agrobacterium_rhizogenes]
FPKM:0.00 TPM:0.00
4092 A_BomoFB_comp10550_c2_seq18
352bp
FPKM:0.00 TPM:0.00
4093 A_BomoFB_comp10550_c2_seq19
1858bp
FPKM:0.00 TPM:0.00
4094 A_BomoFB_comp10550_c2_seq2
1019bp
 PREDICTED:_zinc_finger_protein_845-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4095 A_BomoFB_comp10550_c2_seq20
1016bp
 PREDICTED:_zinc_finger_protein_845-like_[Bombyx_mori]
FPKM:4.34 TPM:4.76
4096 A_BomoFB_comp10550_c2_seq21
835bp
 PREDICTED:_zinc_finger_protein_845-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4097 A_BomoFB_comp10550_c2_seq22
1984bp
 PREDICTED:_translation_initiation_factor_eIF-2B_subunit_delta_[Bombyx_mori]
GO:0001541 P ovarian follicle development
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0014003 P oligodendrocyte development
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0042552 P myelination
GO:0043547 P positive regulation of GTPase activity
GO:0044237 P cellular metabolic process
GO:0045947 P negative regulation of translational initiation
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
GO:0051716 P cellular response to stimulus
FPKM:3.54 TPM:3.88
4098 A_BomoFB_comp10550_c2_seq23
374bp
FPKM:0.00 TPM:0.00
4099 A_BomoFB_comp10550_c2_seq24
1006bp
 putative_pol-like_protein_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
4100 A_BomoFB_comp10550_c2_seq25
283bp
FPKM:1.23 TPM:1.35
4101 A_BomoFB_comp10550_c2_seq26
395bp
FPKM:0.34 TPM:0.37
4102 A_BomoFB_comp10550_c2_seq27
616bp
FPKM:0.00 TPM:0.00
4103 A_BomoFB_comp10550_c2_seq28
6939bp
 putative_conserved_plasma_membrane_protein_[Operophtera_brumata]
GO:0001541 P ovarian follicle development
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0014003 P oligodendrocyte development
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0042552 P myelination
GO:0043547 P positive regulation of GTPase activity
GO:0044237 P cellular metabolic process
GO:0045947 P negative regulation of translational initiation
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
GO:0051716 P cellular response to stimulus
FPKM:0.01 TPM:0.01
4104 A_BomoFB_comp10550_c2_seq29
886bp
 PREDICTED:_zinc_finger_protein_845-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4105 A_BomoFB_comp10550_c2_seq3
950bp
FPKM:0.00 TPM:0.00
4106 A_BomoFB_comp10550_c2_seq30
2300bp
 PREDICTED:_translation_initiation_factor_eIF-2B_subunit_delta_[Bombyx_mori]
GO:0001541 P ovarian follicle development
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0014003 P oligodendrocyte development
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0042552 P myelination
GO:0043547 P positive regulation of GTPase activity
GO:0044237 P cellular metabolic process
GO:0045947 P negative regulation of translational initiation
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
GO:0051716 P cellular response to stimulus
FPKM:3.78 TPM:4.14
4107 A_BomoFB_comp10550_c2_seq31
4925bp
 putative_conserved_plasma_membrane_protein_[Operophtera_brumata]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
FPKM:8.76 TPM:9.60
4108 A_BomoFB_comp10550_c2_seq32
942bp
 PREDICTED:_zinc_finger_protein_845-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4109 A_BomoFB_comp10550_c2_seq33
327bp
FPKM:0.00 TPM:0.00
4110 A_BomoFB_comp10550_c2_seq34
672bp
 putative_pol-like_protein_[Danaus_plexippus]
FPKM:1.46 TPM:1.60
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