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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4141 A_BomoFB_comp10552_c2_seq2
5700bp
 PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:1.78 TPM:1.95
4142 A_BomoFB_comp10552_c2_seq3
755bp
 DC-STAMP_domain-containing_protein_2_[Papilio_machaon]
FPKM:1.66 TPM:1.82
4143 A_BomoFB_comp10552_c2_seq4
913bp
 PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
FPKM:1.72 TPM:1.88
4144 A_BomoFB_comp10552_c2_seq5
1794bp
 PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
FPKM:3.80 TPM:4.16
4145 A_BomoFB_comp10552_c2_seq6
5541bp
 PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:6.90 TPM:7.56
4146 A_BomoFB_comp10552_c2_seq7
221bp
FPKM:2.36 TPM:2.59
4147 A_BomoFB_comp105534_c0_seq1
500bp
 PREDICTED:_uncharacterized_protein_LOC101737750_[Bombyx_mori]
FPKM:4.45 TPM:4.88
4148 A_BomoFB_comp105537_c0_seq1
1403bp
 hypothetical_protein_KGM_01452_[Danaus_plexippus]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.52 TPM:3.85
4149 A_BomoFB_comp10553_c0_seq1
6793bp
 PREDICTED:_twitchin_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0031672 C A band
GO:0046872 F metal ion binding
GO:0051782 P negative regulation of cell division
FPKM:42.19 TPM:46.22
4150 A_BomoFB_comp10554_c0_seq1
1254bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:12.12 TPM:13.28
4151 A_BomoFB_comp10554_c0_seq10
1358bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.02 TPM:0.02
4152 A_BomoFB_comp10554_c0_seq11
2108bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.18 TPM:3.49
4153 A_BomoFB_comp10554_c0_seq12
779bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.93 TPM:2.12
4154 A_BomoFB_comp10554_c0_seq13
1527bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.01 TPM:0.01
4155 A_BomoFB_comp10554_c0_seq14
995bp
 PREDICTED:_uncharacterized_protein_LOC107039435_[Diachasma_alloeum]
FPKM:0.00 TPM:0.00
4156 A_BomoFB_comp10554_c0_seq15
6117bp
 PREDICTED:_nitrogen_permease_regulator_3-like_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0007293 P germarium-derived egg chamber formation
GO:0032007 P negative regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
GO:0038202 P TORC1 signaling
GO:0044754 C autolysosome
GO:0045792 P negative regulation of cell size
GO:0048477 P oogenesis
FPKM:0.06 TPM:0.06
4157 A_BomoFB_comp10554_c0_seq16
2004bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.52 TPM:3.86
4158 A_BomoFB_comp10554_c0_seq17
1470bp
 PREDICTED:_uncharacterized_protein_LOC106677622_[Halyomorpha_halys]
FPKM:2.88 TPM:3.15
4159 A_BomoFB_comp10554_c0_seq18
526bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4160 A_BomoFB_comp10554_c0_seq19
2135bp
 PREDICTED:_uncharacterized_protein_LOC105842539_[Bombyx_mori]
FPKM:4.53 TPM:4.96
4161 A_BomoFB_comp10554_c0_seq2
1008bp
 PREDICTED:_uncharacterized_protein_LOC106677622_[Halyomorpha_halys]
FPKM:0.00 TPM:0.00
4162 A_BomoFB_comp10554_c0_seq20
1457bp
 PREDICTED:_uncharacterized_protein_LOC107039435_[Diachasma_alloeum]
FPKM:0.00 TPM:0.00
4163 A_BomoFB_comp10554_c0_seq21
2298bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.56 TPM:0.62
4164 A_BomoFB_comp10554_c0_seq22
695bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744003_[Bombyx_mori]
FPKM:3.17 TPM:3.48
4165 A_BomoFB_comp10554_c0_seq23
1054bp
 PREDICTED:_uncharacterized_protein_LOC106677622_[Halyomorpha_halys]
FPKM:0.00 TPM:0.00
4166 A_BomoFB_comp10554_c0_seq24
2766bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
FPKM:0.50 TPM:0.55
4167 A_BomoFB_comp10554_c0_seq25
716bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4168 A_BomoFB_comp10554_c0_seq26
2401bp
 PREDICTED:_uncharacterized_protein_K02A2.6-like_[Parasteatoda_tepidariorum]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.00 TPM:0.00
4169 A_BomoFB_comp10554_c0_seq27
3155bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.70 TPM:2.95
4170 A_BomoFB_comp10554_c0_seq28
1548bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.72 TPM:1.89
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