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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1081 A_BomoOtmSK_comp10415_c0_seq1
202bp
FPKM:1.36 TPM:1.47
1082 A_BomoOtmSK_comp1041605_c0_seq1
220bp
FPKM:0.94 TPM:1.02
1083 A_BomoOtmSK_comp1041607_c0_seq1
280bp
 uncharacterized_protein_LOC105842334_[Bombyx_mori]
FPKM:0.86 TPM:0.93
1084 A_BomoOtmSK_comp1041624_c0_seq1
213bp
 anillin-like_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000910 P cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005826 C actomyosin contractile ring
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0007009 P plasma membrane organization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007112 P male meiosis cytokinesis
GO:0007275 P multicellular organism development
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007349 P cellularization
GO:0007423 P sensory organ development
GO:0008017 F microtubule binding
GO:0008104 P protein localization
GO:0008356 P asymmetric cell division
GO:0017022 F myosin binding
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030726 P male germline ring canal formation
GO:0031106 P septin ring organization
GO:0032154 C cleavage furrow
GO:0032189 P maintenance of actomyosin contractile ring localization
GO:0032465 P regulation of cytokinesis
GO:0035323 C male germline ring canal
GO:0043063 P intercellular bridge organization
GO:0045035 P sensory organ precursor cell division
GO:0045172 C germline ring canal
GO:0048477 P oogenesis
GO:0051015 F actin filament binding
GO:0051297 P centrosome cycle
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0070938 C contractile ring
FPKM:3.23 TPM:3.49
1085 A_BomoOtmSK_comp1041628_c0_seq1
283bp
FPKM:0.84 TPM:0.90
1086 A_BomoOtmSK_comp1041635_c0_seq1
206bp
 lysosome_membrane_protein_2-like_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006955 P immune response
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0007204 P positive regulation of cytosolic calcium ion concentration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0030299 P intestinal cholesterol absorption
GO:0031526 C brush border membrane
GO:0031623 P receptor internalization
GO:0033993 P response to lipid
GO:0034197 P triglyceride transport
GO:0044539 P long-chain fatty acid import into cell
GO:0045121 C membrane raft
GO:0050702 P interleukin-1 beta production
GO:0050892 P intestinal absorption
GO:0050909 P sensory perception of taste
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0070508 P cholesterol import
GO:0070542 P response to fatty acid
GO:0070543 P response to linoleic acid
GO:0071404 P cellular response to low-density lipoprotein particle stimulus
GO:0071726 P cellular response to diacyl bacterial lipopeptide
GO:1900227 P positive regulation of NLRP3 inflammasome complex assembly
GO:1990000 P amyloid fibril formation
GO:2000505 P energy homeostasis
FPKM:1.25 TPM:1.34
1087 A_BomoOtmSK_comp1041642_c0_seq1
258bp
FPKM:1.63 TPM:1.76
1088 A_BomoOtmSK_comp1041646_c0_seq1
240bp
FPKM:2.06 TPM:2.22
1089 A_BomoOtmSK_comp1041649_c0_seq1
216bp
FPKM:2.03 TPM:2.19
1090 A_BomoOtmSK_comp1041672_c0_seq1
219bp
FPKM:0.96 TPM:1.04
1091 A_BomoOtmSK_comp10416_c0_seq1
979bp
 PREDICTED:_longitudinals_lacking_protein-like_[Plutella_xylostella]
GO:0000794 C condensed nuclear chromosome
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031519 C PcG protein complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
FPKM:13.23 TPM:14.27
1092 A_BomoOtmSK_comp1041701_c0_seq1
444bp
FPKM:0.49 TPM:0.53
1093 A_BomoOtmSK_comp1041734_c0_seq1
265bp
FPKM:1.01 TPM:1.08
1094 A_BomoOtmSK_comp1041766_c0_seq1
346bp
FPKM:0.79 TPM:0.85
1095 A_BomoOtmSK_comp104176_c0_seq1
488bp
FPKM:2.82 TPM:3.04
1096 A_BomoOtmSK_comp1041771_c0_seq1
204bp
FPKM:2.60 TPM:2.81
1097 A_BomoOtmSK_comp10417_c0_seq1
678bp
FPKM:1.22 TPM:1.31
1098 A_BomoOtmSK_comp1041803_c0_seq1
311bp
 coagulation_factor_VII_isoform_X2_[Bombyx_mori]
FPKM:1.00 TPM:1.07
1099 A_BomoOtmSK_comp1041877_c0_seq1
250bp
FPKM:1.20 TPM:1.29
1100 A_BomoOtmSK_comp1041888_c0_seq1
202bp
FPKM:2.72 TPM:2.94
1101 A_BomoOtmSK_comp10418_c0_seq1
1874bp
 asparagine_synthetase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004066 F asparagine synthase (glutamine-hydrolyzing) activity
GO:0005524 F ATP binding
GO:0006529 P asparagine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016874 F ligase activity
GO:0070981 P L-asparagine biosynthetic process
FPKM:30.24 TPM:32.60
1102 A_BomoOtmSK_comp1041915_c0_seq1
218bp
FPKM:1.96 TPM:2.11
1103 A_BomoOtmSK_comp1041916_c0_seq1
208bp
FPKM:0.00 TPM:0.00
1104 A_BomoOtmSK_comp104193_c0_seq1
733bp
 protein_MON2_homolog_[Bombyx_mori]
GO:0005519 F cytoskeletal regulatory protein binding
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0007318 P pole plasm protein localization
GO:0015031 P protein transport
GO:0031532 P actin cytoskeleton reorganization
FPKM:4.55 TPM:4.90
1105 A_BomoOtmSK_comp1041948_c0_seq1
207bp
 protease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:1.22 TPM:1.31
1106 A_BomoOtmSK_comp1041952_c0_seq1
397bp
FPKM:0.60 TPM:0.65
1107 A_BomoOtmSK_comp1041982_c0_seq1
201bp
FPKM:1.39 TPM:1.50
1108 A_BomoOtmSK_comp10419_c0_seq1
2615bp
 tumor_protein_p63-regulated_gene_1-like_protein_isoform_X2_[Bombyx_mori]
GO:0008021 C synaptic vesicle
GO:0008150 P biological_process
GO:0030054 C cell junction
GO:0031410 C cytoplasmic vesicle
GO:0042802 F identical protein binding
GO:0045202 C synapse
GO:0070062 C extracellular exosome
FPKM:2.07 TPM:2.23
1109 A_BomoOtmSK_comp10419_c0_seq2
2759bp
 tumor_protein_p63-regulated_gene_1-like_protein_isoform_X1_[Bombyx_mori]
GO:0008021 C synaptic vesicle
GO:0030054 C cell junction
GO:0031410 C cytoplasmic vesicle
GO:0042802 F identical protein binding
GO:0045202 C synapse
GO:0070062 C extracellular exosome
FPKM:3.45 TPM:3.72
1110 A_BomoOtmSK_comp10419_c0_seq3
2200bp
 tumor_protein_p63-regulated_gene_1-like_protein_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008021 C synaptic vesicle
GO:0008150 P biological_process
GO:0030054 C cell junction
GO:0031410 C cytoplasmic vesicle
GO:0042802 F identical protein binding
GO:0045202 C synapse
GO:0070062 C extracellular exosome
FPKM:0.21 TPM:0.23
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