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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10416_c0_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_longitudinals_lacking_protein-like_[Plutella_xylostella]
Ontology
GO:0000794 C condensed nuclear chromosome
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031519 C PcG protein complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
Transcript
Level		FPKM:13.23 TPM:14.27
ORF EntryO_BomoOtmSK5475_complete:A_BomoOtmSK_comp10416_c0_seq1
Sequence
(Nucleotide)
TGTCTAGCTGATTGAAAGAAATTATGAAATAGAAAGAAGTGGCTATATTATGCGAGACGG
CGTCTTTATTTTGAGATTTCAATTGCTTAACTTTTACGTGTAGATTTCGAAATATTACGT
GCGCCCCTGGATGTATATTTAATGTGTTTCGTGTGAATTAAACACGAAAAGAAATTGTAG
TTACTGTGTCCGTAGAGTATCATCAAAATGGGTGATCAACAATTCTTTTTAAAATGGAAC
GATTTTCAAACTAACATGGTGACTTCGTTCAGACATTTGAGAGACGAAAAAAGTTTTACA
GATGTTACATTAGCATGTGAAGGACAGACGTGTAAGGCACATAAAATGGTTCTTTCTGCC
TGTAGTCCATACTTCAAAAGTCTATTAGAGGAAAATCCATCGAAACATCCGATAATAATT
CTAAAAGACGTGTCTTATCTACATCTGCAAGCCATTTTAGAGTTCATGTACGCCGGCGAA
GTTAATGTTTCACAGGAACAGCTGCCGGCCTTCCTCAAGACTGCCGCAAGACTTAAGGTG
AAGGGCTTAGCCGAGCCCCCGCCGCAGATGCCAAGCATCAAACGAGAAGGCTAGCCCCCC
GTAAAGTGCCCAAAAGACTATAGTGAACACCAATCTAACTTAGCACCGAATAACTAGTGC
ACACATCCATGTAACGGTAGGACAATATAATACATATATATCAGGTTTTATTTTTCAAAT
ACACAAAATACTTACTGTCGATTTTTAATGTTGATCTTCGTTTTTTTTATTATAATAACA
CATTATTAGATCTTATAATGAATTCGCGTTTGAATTCACAGTCAAATAATTTTTTTTAAG
TCTTTAACCTTTTGATTGCCACGCGGCGCACTGAAGTAATTGTTTCGATTTCTCACTTCG
ATCTTCTTACGAAGGCGCTGGAATATCTATTAGAACTAGCGGTCCCCCGGTAGTCAAAAT
TCGACTATAATTAATTGAA
(979 bp)

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