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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1111 A_BomoOtmSK_comp1041_c0_seq1
302bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.71 TPM:0.77
1112 A_BomoOtmSK_comp1041_c0_seq2
233bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.76 TPM:0.82
1113 A_BomoOtmSK_comp1042015_c0_seq1
271bp
FPKM:0.94 TPM:1.02
1114 A_BomoOtmSK_comp1042053_c0_seq1
215bp
FPKM:0.00 TPM:0.00
1115 A_BomoOtmSK_comp1042085_c0_seq1
255bp
FPKM:1.13 TPM:1.22
1116 A_BomoOtmSK_comp10420_c0_seq1
1770bp
FPKM:0.48 TPM:0.52
1117 A_BomoOtmSK_comp10420_c0_seq2
2194bp
FPKM:1.73 TPM:1.86
1118 A_BomoOtmSK_comp1042133_c0_seq1
247bp
FPKM:1.87 TPM:2.02
1119 A_BomoOtmSK_comp1042154_c0_seq1
207bp
FPKM:2.44 TPM:2.63
1120 A_BomoOtmSK_comp10421_c0_seq1
1718bp
 phosphoribosylformylglycinamidine_synthase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004642 F phosphoribosylformylglycinamidine synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0009156 P ribonucleoside monophosphate biosynthetic process
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
FPKM:0.79 TPM:0.85
1121 A_BomoOtmSK_comp10421_c0_seq2
2661bp
 phosphoribosylformylglycinamidine_synthase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004642 F phosphoribosylformylglycinamidine synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0009156 P ribonucleoside monophosphate biosynthetic process
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
FPKM:22.03 TPM:23.76
1122 A_BomoOtmSK_comp1042200_c0_seq1
233bp
FPKM:1.52 TPM:1.64
1123 A_BomoOtmSK_comp1042204_c0_seq1
253bp
 PREDICTED:_transcription_factor_HNF-4_homolog_isoform_X1_[Amyelois_transitella]
FPKM:1.16 TPM:1.25
1124 A_BomoOtmSK_comp1042254_c0_seq1
364bp
FPKM:0.47 TPM:0.51
1125 A_BomoOtmSK_comp1042260_c0_seq1
214bp
FPKM:0.00 TPM:0.00
1126 A_BomoOtmSK_comp10422_c0_seq1
1703bp
 polymerase_delta-interacting_protein_2_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0016242 P negative regulation of macroautophagy
GO:0030674 F protein-macromolecule adaptor activity
GO:0042645 C mitochondrial nucleoid
GO:0045931 P positive regulation of mitotic cell cycle
GO:0070584 P mitochondrion morphogenesis
FPKM:17.47 TPM:18.83
1127 A_BomoOtmSK_comp10422_c0_seq2
1748bp
 polymerase_delta-interacting_protein_2_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0016242 P negative regulation of macroautophagy
GO:0030674 F protein-macromolecule adaptor activity
GO:0042645 C mitochondrial nucleoid
GO:0045931 P positive regulation of mitotic cell cycle
GO:0070584 P mitochondrion morphogenesis
FPKM:2.69 TPM:2.91
1128 A_BomoOtmSK_comp1042306_c0_seq1
369bp
FPKM:0.92 TPM:0.99
1129 A_BomoOtmSK_comp1042314_c0_seq1
247bp
FPKM:0.62 TPM:0.67
1130 A_BomoOtmSK_comp1042315_c0_seq1
302bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC106708942_[Papilio_machaon]
FPKM:1.42 TPM:1.53
1131 A_BomoOtmSK_comp10423_c0_seq1
2255bp
 HBS1-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0032790 P ribosome disassembly
GO:0070062 C extracellular exosome
FPKM:11.87 TPM:12.80
1132 A_BomoOtmSK_comp1042438_c0_seq1
237bp
FPKM:0.72 TPM:0.77
1133 A_BomoOtmSK_comp1042467_c0_seq1
291bp
FPKM:1.17 TPM:1.26
1134 A_BomoOtmSK_comp10424_c0_seq1
2334bp
 spermatogenesis-associated_protein_20_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008152 P metabolic process
GO:0030154 P cell differentiation
FPKM:12.18 TPM:13.13
1135 A_BomoOtmSK_comp104250_c0_seq1
477bp
FPKM:4.39 TPM:4.73
1136 A_BomoOtmSK_comp1042552_c0_seq1
244bp
FPKM:0.65 TPM:0.70
1137 A_BomoOtmSK_comp1042556_c0_seq1
205bp
FPKM:1.27 TPM:1.37
1138 A_BomoOtmSK_comp1042569_c0_seq1
272bp
 LOW_QUALITY_PROTEIN:_toll-like_receptor_6_[Bombyx_mori]
FPKM:1.40 TPM:1.51
1139 A_BomoOtmSK_comp104257_c0_seq1
1056bp
 protein_hook_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006897 P endocytosis
GO:0008017 F microtubule binding
GO:0030705 P cytoskeleton-dependent intracellular transport
FPKM:4.20 TPM:4.53
1140 A_BomoOtmSK_comp10425_c0_seq1
2753bp
 TBC1_domain_family_member_9_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
FPKM:2.42 TPM:2.61
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