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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
811 A_BomoN4EE_TR100500_c0_g2_i2
1044bp
 hypothetical_protein_RR48_05192_[Papilio_machaon]
FPKM:0.08 TPM:0.10
812 A_BomoN4EE_TR100500_c0_g3_i1
1384bp
 Modifier_of_mdg4,_partial_[Operophtera_brumata]
FPKM:2.34 TPM:3.12
813 A_BomoN4EE_TR100500_c0_g3_i2
1419bp
 Modifier_of_mdg4,_partial_[Operophtera_brumata]
FPKM:0.20 TPM:0.26
814 A_BomoN4EE_TR100501_c0_g1_i1
705bp
FPKM:0.34 TPM:0.45
815 A_BomoN4EE_TR100501_c1_g1_i1
342bp
FPKM:0.00 TPM:0.00
816 A_BomoN4EE_TR100502_c1_g1_i1
875bp
 PREDICTED:_uncharacterized_protein_C9orf85_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:29.19 TPM:38.88
817 A_BomoN4EE_TR100502_c1_g2_i1
1109bp
 PREDICTED:_uncharacterized_protein_C9orf85_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.18 TPM:2.90
818 A_BomoN4EE_TR100502_c1_g3_i1
690bp
FPKM:1.54 TPM:2.06
819 A_BomoN4EE_TR100502_c1_g4_i1
876bp
 PREDICTED:_uncharacterized_protein_C9orf85_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.75 TPM:2.33
820 A_BomoN4EE_TR100502_c3_g1_i1
347bp
FPKM:1.46 TPM:1.94
821 A_BomoN4EE_TR100502_c4_g1_i1
396bp
 PREDICTED:_histone-lysine_N-methyltransferase_SETMAR-like_isoform_X1_[Papilio_machaon]
FPKM:2.28 TPM:3.03
822 A_BomoN4EE_TR100503_c0_g1_i1
278bp
FPKM:2.24 TPM:2.99
823 A_BomoN4EE_TR100504_c0_g1_i1
4946bp
 PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0017022 F myosin binding
GO:0022008 P neurogenesis
FPKM:3.58 TPM:4.77
824 A_BomoN4EE_TR100504_c0_g1_i2
4822bp
 PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0017022 F myosin binding
GO:0022008 P neurogenesis
FPKM:1.25 TPM:1.67
825 A_BomoN4EE_TR100504_c0_g2_i1
350bp
 olfactory_receptor_[Bombyx_mori]
FPKM:5.17 TPM:6.88
826 A_BomoN4EE_TR100504_c0_g3_i1
4934bp
 PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0017022 F myosin binding
GO:0022008 P neurogenesis
FPKM:18.82 TPM:25.07
827 A_BomoN4EE_TR100504_c1_g1_i1
556bp
FPKM:60.02 TPM:79.95
828 A_BomoN4EE_TR100505_c0_g1_i1
3156bp
 putative_piggybac_transposable_element-derived,_partial_[Operophtera_brumata]
FPKM:1.48 TPM:1.97
829 A_BomoN4EE_TR100505_c0_g1_i2
2922bp
 putative_piggybac_transposable_element-derived,_partial_[Operophtera_brumata]
FPKM:0.27 TPM:0.36
830 A_BomoN4EE_TR100506_c0_g1_i1
1328bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:1.70 TPM:2.27
831 A_BomoN4EE_TR100506_c0_g2_i1
748bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:0.28 TPM:0.37
832 A_BomoN4EE_TR100507_c0_g1_i1
772bp
 PREDICTED:_uncharacterized_protein_LOC106136491_[Amyelois_transitella]
FPKM:0.35 TPM:0.47
833 A_BomoN4EE_TR100507_c1_g1_i1
331bp
PREDICTED:_uncharacterized_protein_LOC106711407_[Papilio_machaon]
FPKM:0.21 TPM:0.28
834 A_BomoN4EE_TR100507_c2_g1_i1
660bp
PREDICTED:_uncharacterized_protein_LOC106711407_[Papilio_machaon]
FPKM:0.37 TPM:0.50
835 A_BomoN4EE_TR100508_c0_g1_i1
733bp
 hypothetical_protein_[Bacillus_sp._FJAT-18019]
FPKM:0.70 TPM:0.93
836 A_BomoN4EE_TR100509_c0_g1_i1
6620bp
 PREDICTED:_uncharacterized_protein_LOC101738416_[Bombyx_mori]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006971 P hypotonic response
GO:0006972 P hyperosmotic response
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0016461 C unconventional myosin complex
GO:0016887 F ATP hydrolysis activity
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031268 P pseudopodium organization
GO:0035020 P regulation of Rac protein signal transduction
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0051015 F actin filament binding
FPKM:4.05 TPM:5.40
837 A_BomoN4EE_TR100509_c0_g1_i2
6698bp
 PREDICTED:_uncharacterized_protein_LOC101738416_[Bombyx_mori]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006971 P hypotonic response
GO:0006972 P hyperosmotic response
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0016461 C unconventional myosin complex
GO:0016887 F ATP hydrolysis activity
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031268 P pseudopodium organization
GO:0035020 P regulation of Rac protein signal transduction
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0051015 F actin filament binding
FPKM:0.59 TPM:0.79
838 A_BomoN4EE_TR100509_c0_g1_i3
5884bp
 PREDICTED:_uncharacterized_protein_LOC101738416_[Bombyx_mori]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006971 P hypotonic response
GO:0006972 P hyperosmotic response
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0016461 C unconventional myosin complex
GO:0016887 F ATP hydrolysis activity
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031268 P pseudopodium organization
GO:0035020 P regulation of Rac protein signal transduction
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0051015 F actin filament binding
FPKM:0.33 TPM:0.44
839 A_BomoN4EE_TR10050_c0_g1_i1
271bp
 protein_phosphatase_2C_[Ruminococcus_albus]
FPKM:1.03 TPM:1.37
840 A_BomoN4EE_TR100510_c0_g1_i1
2659bp
FPKM:1.21 TPM:1.61
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