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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100504_c0_g1_i1
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0017022 F myosin binding
GO:0022008 P neurogenesis
Transcript
Level		FPKM:3.58 TPM:4.77
ORF EntryO_BomoN4EE51006_complete:A_BomoN4EE_TR100504_c0_g1_i1
Sequence
(Nucleotide)
GGTGAGTGGTTACCGTCGCCCATGGACTACAGCAATGCCAGGGGCAGAGCCAAGCCGCTG
CCTACCGTTATTCTATTAAAAGACTAAAATTAAAAGAGAAATTAAAATATTTAAAGTACA
AATTAAGATTTAAAGTTTCGTTATTACTTTACTAGTGAGAAGATCCGACGAGTGGCGTCA
ATCTGTAAACCACCGATACCTAACAATAATCTGAAAACCAGTTTAAATGTTAAGGGGGGG
GTCATCTCACGTCGTGCTGGTCGGCGCGCGGCATGGCGGCGTACAGCGCCACCAGGTCCC
CGTCCAGCACGCCCCGCGCCGCCCCGCCCCCCGCCGCGCGCCGCGACGCCTTGTACGTGC
GAAAGGCCCTCGGGTTGAGGCCGGCTATGTGGCAGTAGTAGTTGTTCATGACGTTCTGCA
ACATCAGTAGGCGCCGGTACATCTTCTCCGTGACCGGCAGCACGTAGCCTATGGCGCCGT
CCAGGGTCGTGAACATGCTGACGTGTCGCTTGTGCGAGTTGTCGGAGTCTGGCAGCGAGC
GCACGTTGATGCGGAACATGGCGTGCACCTGCTGGCCCAGGTGGTAGTCGCTCTTGCGTA
TCAGCCGCTGGCCTCCGTAGCTCTCCCTGGCCTGCGGCTGGTACATGAACAGCGCGAAGT
TCCCCTCGGCTTCGCTGACCAGGAAACCGAGATTCGTATTATCCACCATGAACTCCATAT
CGTATATCTGCGCGGTCCTGAAGTCCCTGGAGACCAGCGAGAGCGTCCTGTGCGCGGGCT
GGTAGCGCAGCAGCGAGATGGACTTGTAGACGTCGGCCACCAGGATGAGGTTCTTGACGG
CCAGCATGCGGTGCACGTATATCTGGGTGTCGATGAACGCGACGCCCACTAGGTCGTTGT
CCTTCAGCTGCCATATGTATATCTTCTGTCCGACGGCGGATATGAGGTAGCCGAGCACCT
GCGTGAGCGCGGTCACCGGACCCTTCTGCTCCTTGGAGTAGATCTCCTTGAACCGGTTCT
TGGTCAGCGGCTGCCCGGGCTCCGGGACCACGTCGATTATGTCGTAGATTATTATCCGCC
CCCTAGAAGTGATATCCTCGCTGTAATTATAATTAGTTCCTATCGCTATGTAACCGCGGA
GACCGGATCTGGTTCCTTCGTACGACAGCGACACGTTCTTGAGACACGTCACGTGCTCCC
ACTCGTCCAGCTCGATCTTGGTGTTCGGTATGATCTCCCAGGAGACGGGGGAGAACAGCA
TCACCGAGAAGCGATCCAGCATCGGGTACGGGAACCTGTCCCCTTTGTTCTCGGCAGACT
TCTCCTTGTCCTCGCCGTTGAACTTGTAGTAGACCGTGGTGGGCTGCGAGGTGGAGGCCA
CGAGGCAGTAGGTCCTGGACTCCAGGTGGAACGTGACGTAGTGCGGCGTCATGCGGATGG
GCACCTTGCGCACCGCCCACGCCGCGTCGTACGACAGGTGCGACGGCAGCGCGCAGATGC
GGAGCGACGACTCGGCGTTAAAGTACAGGAAGCCCTGCGGACAATTGGTGTTGTTGAAGG
GCGCGAACGTGTGCACGGGCGGTCGGTCGGCGTGCAGCGGGTGCAGGCGCAGCTCGCCGC
GCGCAGACAAGAACATCATGTAGGGGGTCGCGCCGCAGACGAACACGCCGCTGTACCCGC
CCACGTTGCCAAAGTACCGCAGCTGCCGCACCCCGTCCCGCACGCCGGCCGTCTCGTAGG
TGTCGGCGCTCTGTGCGGTGCTGGGCACGCTCTCGTACCCAAACGGGAACGAGACAGTCA
CCCGGCAGAACCGCAGCTTGAGATTCCCCCGGGGGTATTTGTACGCCTGATAAATCATCA
ATTCATTTTGCATCCTCAGCATCAGTATCACCCTGGAACCCTTGTGCCCCAGACCGACGA
CGCACAGTTCCTTGAGCTTCTCAGCATCAGCGTTGTGTGACGGCGCGCTGATGTCCTCGT
CCTCCATGCTGTCTGACATCGGGACGGACTCCAGGCTGTCCGCCAATATCCTGTTTCCAG
CGCACGAGTCTCTCACCAGGAAACTCAACCTCATTTCCGGCAACGAGTATATCTCCAGGT
TGCCGTTGTCGCGAACGCAGAACAGCCAGTACGTGGGCTTCACCTCCTGCAGGTACTTCT
TCCACCAGCGCGACATCCGACGCGGAACCCCTGGATTCTTGCTTTGCTCCGCCAGCATTA
TGCTGGCCATGGATGCAGGTGTCTGGTCGCCTCCGTACAGCATCTCGTCTTCGTCGTTCA
GCTCATAGACCACGCCGGGCTTGAAGGCCTCCTTCTTCACGTTCTCCTTCAGCTTACCGG
TGAACTCACCTTTGACCTGGTGGCCGGGCTCGGCGAGGTCTGGCGCGAACAGTCCGCTGA
GGTCGCGGTGCGGGGCGGCGCGCACGAGCGGGGGCCGCGCGGGGACGCACTGCCGCGTGG
GCGCCAGCCGACCCGACGGCTGCCCGTCCTTCCCCCTGATCTCTCTCAGGGCCAGCACGA
TGGCGCGGCCGCAGCTGGACGTGACGCACAGGTAGGGGTCCGCGACGGCCGCGTACTGCG
CCGTCCACTCCAGCTGGATCGACTGCAGCTGCACGCCGCCCTTGATGAGTCGAATGGTGG
TGGTGGTGACCTGCACCATGAATTTGTTATTCCCGAGGTTTCCGGCGAAGATGGTGGGCG
AACCCGTCATGAAGCCAGAGTTGTCCACCTCGTTGATCTCTTGGCCAGTTTGCAGAACCA
TGGAGGAGTCGTCCTGCGTCAGTATCAAATACGCGTGCGTCCCTTCGTTTTCTCTGGTGC
TTTCGCTCTCTCCGAAAACCGACCACATGTCGATACAGCCGGGTAAATTGAAAGCAGTAA
TCAGCTGAGGTCTGACCGTCCTCTGCAGCACGGTCAGGGCGCCGTTCTTCCCCCTGCCAC
TACAGGTCACCAGTTCTACCAGAGGATTCTCCTGCTGCCTGCTGTACTCCTCGGAGAGGA
GCTGGGGCTCTCCCATAGACACGTCGCCGATCGGACATATGTTTAACAGCGAATCGCATA
CCTCGAACACGTAGCTGGTGAGTCTTGTGGAGGTGCGTATGTCGCTGCCGTACACCTCGA
GCTCGTCTCCGTCGCTGATCTCGATGACGTTGGAGGCCACGCAGTCGCTGATGGTGTCCA
TGCGCCGCCGCTTCGAGGCCGGGTCGGGCTGCTCCTTCTCTCTGCTCTGCTCTCGTTCGG
TTTCGGCCACGGTCAGATCGACCGTCGCTTCCAGGGGCTTGTCAACGGAGAACAGCATCC
GGTTCTCTCGCTCGGTAACTCGCAGCAGCAGCGAGTTTCCGAGCCGCGACCCCAGGAAAA
GGAAGTCCTCTTCTATAACGCACATGCAGGTGGTGAGCACGGAGGCGGCGGCGCGGTCGA
TGTGGAAGCTTCTGACGGAGCGCACACTGTCCGCCAGCAGCGCCACAACGTACAGCTGGC
CGCCGCGCAGAGACACCGCGAACACGGCGTCCGACAGCCGCGCCACGCACGCGCCCTCCA
GCGTCATGCACACGCCCTCCTGGATCCTCAGGGGAAAATTTGTGGTGTGTGTGGCAACAC
TGTTCAGTGAGACGCCGTAAGGTGGAACCGATTGATTTAAATATATCAATGAGTTGACGG
CCATTATCAAACAGCCACCTAGTGGTTTCGGTACGGGCACGGCTTGGAGACAGTCGAAGG
GCAGACCTGAGGTGGACCAGATGACCGGGTGCACCCGAGCTGACATGTTCAGACTGACGC
CCGCCATCGCGCAGGTGTCGTTGCGAACCGCCGTGCGACCAGGAAATGTTCTGACAGGCT
CATAGAGCAGTAGCAAAGTAGGCTCGTAATAGCCATGCAAGAATTGTATGTCTAATATGT
TATCAATCTTCTCGTCTAGGTCCTTGAGTATTATTATGTATGAGGCCAGTGTTGGTGCCC
TGTTCATAGTATGAGCTGCTTGATTTTTCTTTGTGTCAGAGAGGGGTTTGGCCTCAAGAG
GATCCCCTTCTTCAGAGGTAATGTCCTTCCTAAACGGAAGGACTGCAAGTTTCTTCCCAT
ACAACAACATCACAGCACATCGGAACTCAGGATCTACTCTGATCCATGGTATATGAGGAT
GAGTTGTCCAACCGCCCTTCATATCATCCTCTTCAAAATAATGCATACTCAATGTCACCA
AGTTATTGGTCTGTGGATCATATTGGAGCACAGATAGTTTAGCTTCTTTGAATGAAACCA
ACAGGATATCTCGACCAGAACTTTGACAGCGTACAGAAGCTAAAGACATCACATTACCCC
ATAATGTATATGTCGCTAAGCATTCCAACTTCATCTTCGGGGGAATCGGCTGACCGGCTG
CATTAATCTCTTTTGTGTGGCCTTCGGGCAGCAGCCTGAAGACCTTGATGATATTGGCAC
CGGCGGTGACCAGACAAACCTCGTCATTGTTAAAGAAATAACAGCTAACCGCGTGCTCTA
TACCAGTCGCTGGATGAGTCGTTCGACAAATCGAAAACATTATTCGTTAAACGTTCGATT
TTGAGGTTATGAACTAAAACACTTTCAACACTAAAATCTGATATGTTTGCTTGAATCATT
AATTTACAAACAGATAACAACAATCAAATATGGTCCTGATTTAACAAAATGCTGTTCAGT
AACTCTAATTTAATCTGAGAAAAACATTGTATCAAACATCGTCGCTTTGTTGATGTCAGT
TCTGAAACTTGATTTCTTTCTTACTATTTGAACTTGTTTTGTATATTTTAAATTAAAAGA
ATACGTTTAATTTTAACACAATAGTGTTTCGTGGTATAGATCCACGATGAACATTTGAAT
TGTTCAATATCGTTTTTATAAAACAAAAGAAGTTATTTGTGTGGTTTAAAAATTTAACTT
GTTCCAGTTACCAGTTGTTTCCGAAC
(4946 bp)

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