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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
841 A_BomoN4EE_TR100511_c0_g1_i1
310bp
 PREDICTED:_histone-lysine_N-methyltransferase_SETMAR-like_[Camponotus_floridanus]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:3.01 TPM:4.01
842 A_BomoN4EE_TR100511_c0_g2_i1
289bp
 PREDICTED:_histone-lysine_N-methyltransferase_SETMAR-like_[Camponotus_floridanus]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:7.04 TPM:9.37
843 A_BomoN4EE_TR100512_c0_g1_i1
349bp
 MULTISPECIES:_hypothetical_protein_[Actinobacteria]
FPKM:2.21 TPM:2.94
844 A_BomoN4EE_TR100512_c0_g1_i2
349bp
FPKM:0.00 TPM:0.00
845 A_BomoN4EE_TR100512_c0_g2_i1
1456bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:1.81 TPM:2.42
846 A_BomoN4EE_TR100512_c1_g1_i1
431bp
FPKM:0.24 TPM:0.32
847 A_BomoN4EE_TR100513_c0_g1_i1
646bp
 non-ribosomal_peptide_synthetase_[Streptomyces_sp._CNQ-525]
FPKM:0.51 TPM:0.68
848 A_BomoN4EE_TR100514_c0_g1_i1
1248bp
 hypothetical_protein_KGM_12362_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
849 A_BomoN4EE_TR100514_c0_g2_i1
1257bp
 hypothetical_protein_KGM_12362_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
850 A_BomoN4EE_TR100514_c0_g3_i1
1927bp
 PREDICTED:_uncharacterized_protein_LOC101740855_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:2.72 TPM:3.63
851 A_BomoN4EE_TR100514_c0_g3_i2
1936bp
 PREDICTED:_uncharacterized_protein_LOC101740855_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:5.17 TPM:6.89
852 A_BomoN4EE_TR100515_c0_g1_i1
1981bp
FPKM:1.03 TPM:1.37
853 A_BomoN4EE_TR100515_c0_g2_i1
1982bp
FPKM:0.00 TPM:0.00
854 A_BomoN4EE_TR100515_c0_g3_i1
867bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_8-like_[Bombyx_mori]
FPKM:0.92 TPM:1.23
855 A_BomoN4EE_TR100515_c1_g1_i1
944bp
FPKM:1.12 TPM:1.49
856 A_BomoN4EE_TR100516_c0_g1_i1
1774bp
 hypothetical_protein_RR48_00058_[Papilio_machaon]
FPKM:4.77 TPM:6.35
857 A_BomoN4EE_TR100516_c0_g1_i2
1874bp
 PREDICTED:_uncharacterized_protein_LOC105841802_[Bombyx_mori]
FPKM:9.45 TPM:12.59
858 A_BomoN4EE_TR100517_c0_g1_i1
1113bp
 Von_Hippel-Lindau_disease_tumor_suppressor_[Papilio_machaon]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000902 P cell morphogenesis
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0008134 F transcription factor binding
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0019899 F enzyme binding
GO:0030891 C VCB complex
GO:0043066 P negative regulation of apoptotic process
GO:0045597 P positive regulation of cell differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0050821 P protein stabilization
GO:0061418 P regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0061428 P negative regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0061630 F ubiquitin protein ligase activity
FPKM:2.77 TPM:3.69
859 A_BomoN4EE_TR100517_c0_g2_i1
1550bp
 PREDICTED:_trafficking_protein_particle_complex_subunit_2-like_protein_[Papilio_polytes]
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0048471 C perinuclear region of cytoplasm
FPKM:13.43 TPM:17.88
860 A_BomoN4EE_TR100517_c0_g2_i2
1741bp
 Von_Hippel-Lindau_disease_tumor_suppressor_[Papilio_machaon]
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0048471 C perinuclear region of cytoplasm
FPKM:3.42 TPM:4.55
861 A_BomoN4EE_TR100518_c0_g1_i1
3330bp
 PREDICTED:_protein_FAN-like_isoform_X2_[Bombyx_mori]
GO:0005123 F death receptor binding
GO:0005543 F phospholipid binding
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
FPKM:4.15 TPM:5.52
862 A_BomoN4EE_TR100518_c0_g1_i2
3103bp
 PREDICTED:_protein_FAN-like_isoform_X2_[Bombyx_mori]
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006672 P ceramide metabolic process
GO:0007165 P signal transduction
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
GO:2000304 P positive regulation of ceramide biosynthetic process
FPKM:19.18 TPM:25.54
863 A_BomoN4EE_TR100519_c0_g1_i1
2742bp
 PREDICTED:_uncharacterized_protein_LOC106719879_[Papilio_machaon]
FPKM:52.72 TPM:70.23
864 A_BomoN4EE_TR100519_c1_g1_i1
2049bp
FPKM:1.17 TPM:1.56
865 A_BomoN4EE_TR100519_c2_g1_i1
563bp
FPKM:0.78 TPM:1.04
866 A_BomoN4EE_TR10051_c0_g1_i1
307bp
FPKM:0.74 TPM:0.99
867 A_BomoN4EE_TR100520_c0_g1_i1
1555bp
FPKM:3.48 TPM:4.63
868 A_BomoN4EE_TR100520_c0_g2_i1
1554bp
FPKM:0.68 TPM:0.90
869 A_BomoN4EE_TR100520_c1_g1_i1
485bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:6.25 TPM:8.32
870 A_BomoN4EE_TR100520_c1_g2_i1
486bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
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