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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100504_c0_g1_i2
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0017022 F myosin binding
GO:0022008 P neurogenesis
Transcript
Level		FPKM:1.25 TPM:1.67
ORF EntryO_BomoN4EE51009_complete:A_BomoN4EE_TR100504_c0_g1_i2
Sequence
(Nucleotide)
TTTGTACCGATTTTCTTTGCGATTTTACTAGTGAGAAGATCCGACGAGTGGCGTCAATCT
GTAAACCACCGATACCTAACAATAATCTGAAAACCAGTTTAAATGTTAAGGGGGGGGTCA
TCTCACGTCGTGCTGGTCGGCGCGCGGCATGGCGGCGTACAGCGCCACCAGGTCCCCGTC
CAGCACGCCCCGCGCCGCCCCGCCCCCCGCCGCGCGCCGCGACGCCTTGTACGTGCGAAA
GGCCCTCGGGTTGAGGCCGGCTATGTGGCAGTAGTAGTTGTTCATGACGTTCTGCAACAT
CAGTAGGCGCCGGTACATCTTCTCCGTGACCGGCAGCACGTAGCCTATGGCGCCGTCCAG
GGTCGTGAACATGCTGACGTGTCGCTTGTGCGAGTTGTCGGAGTCTGGCAGCGAGCGCAC
GTTGATGCGGAACATGGCGTGCACCTGCTGGCCCAGGTGGTAGTCGCTCTTGCGTATCAG
CCGCTGGCCTCCGTAGCTCTCCCTGGCCTGCGGCTGGTACATGAACAGCGCGAAGTTCCC
CTCGGCTTCGCTGACCAGGAAACCGAGATTCGTATTATCCACCATGAACTCCATATCGTA
TATCTGCGCGGTCCTGAAGTCCCTGGAGACCAGCGAGAGCGTCCTGTGCGCGGGCTGGTA
GCGCAGCAGCGAGATGGACTTGTAGACGTCGGCCACCAGGATGAGGTTCTTGACGGCCAG
CATGCGGTGCACGTATATCTGGGTGTCGATGAACGCGACGCCCACTAGGTCGTTGTCCTT
CAGCTGCCATATGTATATCTTCTGTCCGACGGCGGATATGAGGTAGCCGAGCACCTGCGT
GAGCGCGGTCACCGGACCCTTCTGCTCCTTGGAGTAGATCTCCTTGAACCGGTTCTTGGT
CAGCGGCTGCCCGGGCTCCGGGACCACGTCGATTATGTCGTAGATTATTATCCGCCCCCT
AGAAGTGATATCCTCGCTGTAATTATAATTAGTTCCTATCGCTATGTAACCGCGGAGACC
GGATCTGGTTCCTTCGTACGACAGCGACACGTTCTTGAGACACGTCACGTGCTCCCACTC
GTCCAGCTCGATCTTGGTGTTCGGTATGATCTCCCAGGAGACGGGGGAGAACAGCATCAC
CGAGAAGCGATCCAGCATCGGGTACGGGAACCTGTCCCCTTTGTTCTCGGCAGACTTCTC
CTTGTCCTCGCCGTTGAACTTGTAGTAGACCGTGGTGGGCTGCGAGGTGGAGGCCACGAG
GCAGTAGGTCCTGGACTCCAGGTGGAACGTGACGTAGTGCGGCGTCATGCGGATGGGCAC
CTTGCGCACCGCCCACGCCGCGTCGTACGACAGGTGCGACGGCAGCGCGCAGATGCGGAG
CGACGACTCGGCGTTAAAGTACAGGAAGCCCTGCGGACAATTGGTGTTGTTGAAGGGCGC
GAACGTGTGCACGGGCGGTCGGTCGGCGTGCAGCGGGTGCAGGCGCAGCTCGCCGCGCGC
AGACAAGAACATCATGTAGGGGGTCGCGCCGCAGACGAACACGCCGCTGTACCCGCCCAC
GTTGCCAAAGTACCGCAGCTGCCGCACCCCGTCCCGCACGCCGGCCGTCTCGTAGGTGTC
GGCGCTCTGTGCGGTGCTGGGCACGCTCTCGTACCCAAACGGGAACGAGACAGTCACCCG
GCAGAACCGCAGCTTGAGATTCCCCCGGGGGTATTTGTACGCCTGATAAATCATCAATTC
ATTTTGCATCCTCAGCATCAGTATCACCCTGGAACCCTTGTGCCCCAGACCGACGACGCA
CAGTTCCTTGAGCTTCTCAGCATCAGCGTTGTGTGACGGCGCGCTGATGTCCTCGTCCTC
CATGCTGTCTGACATCGGGACGGACTCCAGGCTGTCCGCCAATATCCTGTTTCCAGCGCA
CGAGTCTCTCACCAGGAAACTCAACCTCATTTCCGGCAACGAGTATATCTCCAGGTTGCC
GTTGTCGCGAACGCAGAACAGCCAGTACGTGGGCTTCACCTCCTGCAGGTACTTCTTCCA
CCAGCGCGACATCCGACGCGGAACCCCTGGATTCTTGCTTTGCTCCGCCAGCATTATGCT
GGCCATGGATGCAGGTGTCTGGTCGCCTCCGTACAGCATCTCGTCTTCGTCGTTCAGCTC
ATAGACCACGCCGGGCTTGAAGGCCTCCTTCTTCACGTTCTCCTTCAGCTTACCGGTGAA
CTCACCTTTGACCTGGTGGCCGGGCTCGGCGAGGTCTGGCGCGAACAGTCCGCTGAGGTC
GCGGTGCGGGGCGGCGCGCACGAGCGGGGGCCGCGCGGGGACGCACTGCCGCGTGGGCGC
CAGCCGACCCGACGGCTGCCCGTCCTTCCCCCTGATCTCTCTCAGGGCCAGCACGATGGC
GCGGCCGCAGCTGGACGTGACGCACAGGTAGGGGTCCGCGACGGCCGCGTACTGCGCCGT
CCACTCCAGCTGGATCGACTGCAGCTGCACGCCGCCCTTGATGAGTCGAATGGTGGTGGT
GGTGACCTGCACCATGAATTTGTTATTCCCGAGGTTTCCGGCGAAGATGGTGGGCGAACC
CGTCATGAAGCCAGAGTTGTCCACCTCGTTGATCTCTTGGCCAGTTTGCAGAACCATGGA
GGAGTCGTCCTGCGTCAGTATCAAATACGCGTGCGTCCCTTCGTTTTCTCTGGTGCTTTC
GCTCTCTCCGAAAACCGACCACATGTCGATACAGCCGGGTAAATTGAAAGCAGTAATCAG
CTGAGGTCTGACCGTCCTCTGCAGCACGGTCAGGGCGCCGTTCTTCCCCCTGCCACTACA
GGTCACCAGTTCTACCAGAGGATTCTCCTGCTGCCTGCTGTACTCCTCGGAGAGGAGCTG
GGGCTCTCCCATAGACACGTCGCCGATCGGACATATGTTTAACAGCGAATCGCATACCTC
GAACACGTAGCTGGTGAGTCTTGTGGAGGTGCGTATGTCGCTGCCGTACACCTCGAGCTC
GTCTCCGTCGCTGATCTCGATGACGTTGGAGGCCACGCAGTCGCTGATGGTGTCCATGCG
CCGCCGCTTCGAGGCCGGGTCGGGCTGCTCCTTCTCTCTGCTCTGCTCTCGTTCGGTTTC
GGCCACGGTCAGATCGACCGTCGCTTCCAGGGGCTTGTCAACGGAGAACAGCATCCGGTT
CTCTCGCTCGGTAACTCGCAGCAGCAGCGAGTTTCCGAGCCGCGACCCCAGGAAAAGGAA
GTCCTCTTCTATAACGCACATGCAGGTGGTGAGCACGGAGGCGGCGGCGCGGTCGATGTG
GAAGCTTCTGACGGAGCGCACACTGTCCGCCAGCAGCGCCACAACGTACAGCTGGCCGCC
GCGCAGAGACACCGCGAACACGGCGTCCGACAGCCGCGCCACGCACGCGCCCTCCAGCGT
CATGCACACGCCCTCCTGGATCCTCAGGGGAAAATTTGTGGTGTGTGTGGCAACACTGTT
CAGTGAGACGCCGTAAGGTGGAACCGATTGATTTAAATATATCAATGAGTTGACGGCCAT
TATCAAACAGCCACCTAGTGGTTTCGGTACGGGCACGGCTTGGAGACAGTCGAAGGGCAG
ACCTGAGGTGGACCAGATGACCGGGTGCACCCGAGCTGACATGTTCAGACTGACGCCCGC
CATCGCGCAGGTGTCGTTGCGAACCGCCGTGCGACCAGGAAATGTTCTGACAGGCTCATA
GAGCAGTAGCAAAGTAGGCTCGTAATAGCCATGCAAGAATTGTATGTCTAATATGTTATC
AATCTTCTCGTCTAGGTCCTTGAGTATTATTATGTATGAGGCCAGTGTTGGTGCCCTGTT
CATAGTATGAGCTGCTTGATTTTTCTTTGTGTCAGAGAGGGGTTTGGCCTCAAGAGGATC
CCCTTCTTCAGAGGTAATGTCCTTCCTAAACGGAAGGACTGCAAGTTTCTTCCCATACAA
CAACATCACAGCACATCGGAACTCAGGATCTACTCTGATCCATGGTATATGAGGATGAGT
TGTCCAACCGCCCTTCATATCATCCTCTTCAAAATAATGCATACTCAATGTCACCAAGTT
ATTGGTCTGTGGATCATATTGGAGCACAGATAGTTTAGCTTCTTTGAATGAAACCAACAG
GATATCTCGACCAGAACTTTGACAGCGTACAGAAGCTAAAGACATCACATTACCCCATAA
TGTATATGTCGCTAAGCATTCCAACTTCATCTTCGGGGGAATCGGCTGACCGGCTGCATT
AATCTCTTTTGTGTGGCCTTCGGGCAGCAGCCTGAAGACCTTGATGATATTGGCACCGGC
GGTGACCAGACAAACCTCGTCATTGTTAAAGAAATAACAGCTAACCGCGTGCTCTATACC
AGTCGCTGGATGAGTCGTTCGACAAATCGAAAACATTATTCGTTAAACGTTCGATTTTGA
GGTTATGAACTAAAACACTTTCAACACTAAAATCTGATATGTTTGCTTGAATCATTAATT
TACAAACAGATAACAACAATCAAATATGGTCCTGATTTAACAAAATGCTGTTCAGTAACT
CTAATTTAATCTGAGAAAAACATTGTATCAAACATCGTCGCTTTGTTGATGTCAGTTCTG
AAACTTGATTTCTTTCTTACTATTTGAACTTGTTTTGTATATTTTAAATTAAAAGAATAC
GTTTAATTTTAACACAATAGTGTTTCGTGGTATAGATCCACGATGAACATTTGAATTGTT
CAATATCGTTTTTATAAAACAAAAGAAGTTATTTGTGTGGTTTAAAAATTTAACTTGTTC
CAGTTACCAGTTGTTTCCGAAC
(4822 bp)

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