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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100504_c0_g3_i1
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0017022 F myosin binding
GO:0022008 P neurogenesis
Transcript
Level		FPKM:18.82 TPM:25.07
ORF EntryO_BomoN4EE51012_complete:A_BomoN4EE_TR100504_c0_g3_i1
Sequence
(Nucleotide)
ATGAGCATCCTTTTTTTTTTTTTTATTGTCCTTGTAGGCAGACGAGCTTACGGCCCAACC
GATGGTGAGTGGTTACTGTTGCCCATGGACATCAGCAATGTTAGGAACAGAACCAAGCCG
CTGCCTAAATTAAAACATATACATATATATTAAGAAACTAAAAATGCGCGGTCAGTCTGT
CTATCTCGTACAAGTCCGACATTATCTCCTCGACTTTTGTACCGATTTTCTTTGCGATGT
CGTGCTGGTCGGCGCGCGGCATGGCGGCGTACAGCGCCACCAGGTCCCCGTCCAGCACGC
CCCGCGCCGCCCCGCCCCCCGCCGCGCGCCGCGACGCCTTGTACGTGCGAAAGGCCCTCG
GGTTGAGGCCGGCTATGTGGCAGTAGTAGTTGTTCATGACGTTCTGCAACATCAGTAGGC
GCCGGTACATCTTCTCCGTGACCGGCAGCACGTAGCCTATGGCGCCGTCCAGGGTCGTGA
ACATGCTGACGTGTCGCTTGTGCGAGTTGTCGGAGTCTGGCAGCGAGCGCACGTTGATGC
GGAACATGGCGTGCACCTGCTGGCCCAGGTGGTAGTCGCTCTTGCGTATCAGCCGCTGGC
CTCCGTAGCTCTCCCTGGCCTGCGGCTGGTACATGAACAGCGCGAAGTTCCCCTCGGCTT
CGCTGACCAGGAAACCGAGATTCGTATTATCCACCATGAACTCCATATCGTATATCTGCG
CGGTCCTGAAGTCCCTGGAGACCAGCGAGAGCGTCCTGTGCGCGGGCTGGTAGCGCAGCA
GCGAGATGGACTTGTAGACGTCGGCCACCAGGATGAGGTTCTTGACGGCCAGCATGCGGT
GCACGTATATCTGGGTGTCGATGAACGCGACGCCCACTAGGTCGTTGTCCTTCAGCTGCC
ATATGTATATCTTCTGTCCGACGGCGGATATGAGGTAGCCGAGCACCTGCGTGAGCGCGG
TCACCGGACCCTTCTGCTCCTTGGAGTAGATCTCCTTGAACCGGTTCTTGGTCAGCGGCT
GCCCGGGCTCCGGGACCACGTCGATTATGTCGTAGATTATTATCCGCCCCCTAGAAGTGA
TATCCTCGCTGTAATTATAATTAGTTCCTATCGCTATGTAACCGCGGAGACCGGATCTGG
TTCCTTCGTACGACAGCGACACGTTCTTGAGACACGTCACGTGCTCCCACTCGTCCAGCT
CGATCTTGGTGTTCGGTATGATCTCCCAGGAGACGGGGGAGAACAGCATCACCGAGAAGC
GATCCAGCATCGGGTACGGGAACCTGTCCCCTTTGTTCTCGGCAGACTTCTCCTTGTCCT
CGCCGTTGAACTTGTAGTAGACCGTGGTGGGCTGCGAGGTGGAGGCCACGAGGCAGTAGG
TCCTGGACTCCAGGTGGAACGTGACGTAGTGCGGCGTCATGCGGATGGGCACCTTGCGCA
CCGCCCACGCCGCGTCGTACGACAGGTGCGACGGCAGCGCGCAGATGCGGAGCGACGACT
CGGCGTTAAAGTACAGGAAGCCCTGCGGACAATTGGTGTTGTTGAAGGGCGCGAACGTGT
GCACGGGCGGTCGGTCGGCGTGCAGCGGGTGCAGGCGCAGCTCGCCGCGCGCAGACAAGA
ACATCATGTAGGGGGTCGCGCCGCAGACGAACACGCCGCTGTACCCGCCCACGTTGCCAA
AGTACCGCAGCTGCCGCACCCCGTCCCGCACGCCGGCCGTCTCGTAGGTGTCGGCGCTCT
GTGCGGTGCTGGGCACGCTCTCGTACCCAAACGGGAACGAGACAGTCACCCGGCAGAACC
GCAGCTTGAGATTCCCCCGGGGGTATTTGTACGCCTGATAAATCATCAATTCATTTTGCA
TCCTCAGCATCAGTATCACCCTGGAACCCTTGTGCCCCAGACCGACGACGCACAGTTCCT
TGAGCTTCTCAGCATCAGCGTTGTGTGACGGCGCGCTGATGTCCTCGTCCTCCATGCTGT
CTGACATCGGGACGGACTCCAGGCTGTCCGCCAATATCCTGTTTCCAGCGCACGAGTCTC
TCACCAGGAAACTCAACCTCATTTCCGGCAACGAGTATATCTCCAGGTTGCCGTTGTCGC
GAACGCAGAACAGCCAGTACGTGGGCTTCACCTCCTGCAGGTACTTCTTCCACCAGCGCG
ACATCCGACGCGGAACCCCTGGATTCTTGCTTTGCTCCGCCAGCATTATGCTGGCCATGG
ATGCAGGTGTCTGGTCGCCTCCGTACAGCATCTCGTCTTCGTCGTTCAGCTCATAGACCA
CGCCGGGCTTGAAGGCCTCCTTCTTCACGTTCTCCTTCAGCTTACCGGTGAACTCACCTT
TGACCTGGTGGCCGGGCTCGGCGAGGTCTGGCGCGAACAGTCCGCTGAGGTCGCGGTGCG
GGGCGGCGCGCACGAGCGGGGGCCGCGCGGGGACGCACTGCCGCGTGGGCGCCAGCCGAC
CCGACGGCTGCCCGTCCTTCCCCCTGATCTCTCTCAGGGCCAGCACGATGGCGCGGCCGC
AGCTGGACGTGACGCACAGGTAGGGGTCCGCGACGGCCGCGTACTGCGCCGTCCACTCCA
GCTGGATCGACTGCAGCTGCACGCCGCCCTTGATGAGTCGAATGGTGGTGGTGGTGACCT
GCACCATGAATTTGTTATTCCCGAGGTTTCCGGCGAAGATGGTGGGCGAACCCGTCATGA
AGCCAGAGTTGTCCACCTCGTTGATCTCTTGGCCAGTTTGCAGAACCATGGAGGAGTCGT
CCTGCGTCAGTATCAAATACGCGTGCGTCCCTTCGTTTTCTCTGGTGCTTTCGCTCTCTC
CGAAAACCGACCACATGTCGATACAGCCGGGTAAATTGAAAGCAGTAATCAGCTGAGGTC
TGACCGTCCTCTGCAGCACGGTCAGGGCGCCGTTCTTCCCCCTGCCACTACAGGTCACCA
GTTCTACCAGAGGATTCTCCTGCTGCCTGCTGTACTCCTCGGAGAGGAGCTGGGGCTCTC
CCATAGACACGTCGCCGATCGGACATATGTTTAACAGCGAATCGCATACCTCGAACACGT
AGCTGGTGAGTCTTGTGGAGGTGCGTATGTCGCTGCCGTACACCTCGAGCTCGTCTCCGT
CGCTGATCTCGATGACGTTGGAGGCCACGCAGTCGCTGATGGTGTCCATGCGCCGCCGCT
TCGAGGCCGGGTCGGGCTGCTCCTTCTCTCTGCTCTGCTCTCGTTCGGTTTCGGCCACGG
TCAGATCGACCGTCGCTTCCAGGGGCTTGTCAACGGAGAACAGCATCCGGTTCTCTCGCT
CGGTAACTCGCAGCAGCAGCGAGTTTCCGAGCCGCGACCCCAGGAAAAGGAAGTCCTCTT
CTATAACGCACATGCAGGTGGTGAGCACGGAGGCGGCGGCGCGGTCGATGTGGAAGCTTC
TGACGGAGCGCACACTGTCCGCCAGCAGCGCCACAACGTACAGCTGGCCGCCGCGCAGAG
ACACCGCGAACACGGCGTCCGACAGCCGCGCCACGCACGCGCCCTCCAGCGTCATGCACA
CGCCCTCCTGGATCCTCAGGGGAAAATTTGTGGTGTGTGTGGCAACACTGTTCAGTGAGA
CGCCGTAAGGTGGAACCGATTGATTTAAATATATCAATGAGTTGACGGCCATTATCAAAC
AGCCACCTAGTGGTTTCGGTACGGGCACGGCTTGGAGACAGTCGAAGGGCAGACCTGAGG
TGGACCAGATGACCGGGTGCACCCGAGCTGACATGTTCAGACTGACGCCCGCCATCGCGC
AGGTGTCGTTGCGAACCGCCGTGCGACCAGGAAATGTTCTGACAGGCTCATAGAGCAGTA
GCAAAGTAGGCTCGTAATAGCCATGCAAGAATTGTATGTCTAATATGTTATCAATCTTCT
CGTCTAGGTCCTTGAGTATTATTATGTATGAGGCCAGTGTTGGTGCCCTGTTCATAGTAT
GAGCTGCTTGATTTTTCTTTGTGTCAGAGAGGGGTTTGGCCTCAAGAGGATCCCCTTCTT
CAGAGGTAATGTCCTTCCTAAACGGAAGGACTGCAAGTTTCTTCCCATACAACAACATCA
CAGCACATCGGAACTCAGGATCTACTCTGATCCATGGTATATGAGGATGAGTTGTCCAAC
CGCCCTTCATATCATCCTCTTCAAAATAATGCATACTCAATGTCACCAAGTTATTGGTCT
GTGGATCATATTGGAGCACAGATAGTTTAGCTTCTTTGAATGAAACCAACAGGATATCTC
GACCAGAACTTTGACAGCGTACAGAAGCTAAAGACATCACATTACCCCATAATGTATATG
TCGCTAAGCATTCCAACTTCATCTTCGGGGGAATCGGCTGACCGGCTGCATTAATCTCTT
TTGTGTGGCCTTCGGGCAGCAGCCTGAAGACCTTGATGATATTGGCACCGGCGGTGACCA
GACAAACCTCGTCATTGTTAAAGAAATAACAGCTAACCGCGTGCTCTATACCAGTCGCTG
GATGAGTCGTTCGACAAATCGAAAACATTATTCGTTAAACGTTCGATTTTGAGGTTATGA
ACTAAAACACTTTCAACACTAAAATCTGATATGTTTGCTTGAATCATTAATTTACAAACA
GATAACAACAATCAAATATGGTCCTGATTTAACAAAATGCTGTTCAGTAACTCTAATTTA
ATCTGAGAAAAACATTGTATCAAACATCGTCGCTTTGTTGATGTCAGTTCTGAAACTTGA
TTTCTTTCTTACTATTTGAACTTGTTTTGTATATTTTAAATTAAAAGAATACGTTTAATT
TTAACACAATAGTGTTTCGTGGTATAGATCCACGATGAACATTTGAATTGTTCAATATCG
TTTTTATAAAACAAAAGAAGTTATTTGTGTGGTTTAAAAATTTAACTTGTTCCAGTTACC
AGTTGTTTCCGAAC
(4934 bp)

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