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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
811 A_BomoSK_comp10404_c0_seq1
1408bp
 PREDICTED:_persulfide_dioxygenase_ETHE1,_mitochondrial_[Papilio_polytes]
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006749 P glutathione metabolic process
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0050313 F sulfur dioxygenase activity
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070813 P hydrogen sulfide metabolic process
FPKM:5.71 TPM:5.74
812 A_BomoSK_comp10405_c0_seq1
804bp
 PREDICTED:_formin-2-like_[Plutella_xylostella]
FPKM:0.60 TPM:0.60
813 A_BomoSK_comp10405_c0_seq2
2067bp
 PREDICTED:_formin-like_protein_12,_partial_[Papilio_machaon]
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005938 C cell cortex
GO:0006810 P transport
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007304 P chorion-containing eggshell formation
GO:0007315 P pole plasm assembly
GO:0007316 P pole plasm RNA localization
GO:0008017 F microtubule binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030029 P actin filament-based process
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045010 P actin nucleation
GO:0045451 P pole plasm oskar mRNA localization
GO:0048477 P oogenesis
FPKM:5.15 TPM:5.18
814 A_BomoSK_comp1040763_c0_seq1
249bp
FPKM:1.69 TPM:1.70
815 A_BomoSK_comp10407_c0_seq1
4918bp
 PREDICTED:_uncharacterized_protein_LOC101743883_isoform_X2_[Bombyx_mori]
FPKM:0.53 TPM:0.53
816 A_BomoSK_comp10407_c0_seq2
4989bp
 PREDICTED:_uncharacterized_protein_LOC101743883_isoform_X2_[Bombyx_mori]
FPKM:1.29 TPM:1.30
817 A_BomoSK_comp104085_c0_seq1
744bp
 COMM_domain_containing_4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
FPKM:5.36 TPM:5.39
818 A_BomoSK_comp10408_c0_seq1
667bp
FPKM:2.11 TPM:2.13
819 A_BomoSK_comp10408_c1_seq1
1705bp
FPKM:2.59 TPM:2.61
820 A_BomoSK_comp10408_c2_seq1
702bp
 PREDICTED:_TNF_receptor-associated_factor_4_isoform_X3_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005164 F tumor necrosis factor receptor binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007585 P respiratory gaseous exchange by respiratory system
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0019901 F protein kinase binding
GO:0030054 C cell junction
GO:0030323 P respiratory tube development
GO:0031625 F ubiquitin protein ligase binding
GO:0031996 F thioesterase binding
GO:0042981 P regulation of apoptotic process
GO:0045860 P positive regulation of protein kinase activity
GO:0046330 P positive regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050699 F WW domain binding
GO:0090073 P positive regulation of protein homodimerization activity
FPKM:2.73 TPM:2.75
821 A_BomoSK_comp10409_c0_seq1
426bp
 hypothetical_protein_[Vibrio_alginolyticus]
FPKM:3.78 TPM:3.80
822 A_BomoSK_comp10410_c0_seq1
764bp
 PREDICTED:_cysteine_and_histidine-rich_protein_1_homolog_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0046872 F metal ion binding
FPKM:0.62 TPM:0.63
823 A_BomoSK_comp10410_c0_seq2
1024bp
 PREDICTED:_cysteine_and_histidine-rich_protein_1_homolog_isoform_X4_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0046872 F metal ion binding
FPKM:4.30 TPM:4.32
824 A_BomoSK_comp10410_c0_seq3
764bp
 PREDICTED:_cysteine_and_histidine-rich_protein_1_homolog_isoform_X4_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:15.00 TPM:15.08
825 A_BomoSK_comp104116_c0_seq1
605bp
 PREDICTED:_protein_pangolin,_isoforms_A/H/I/S_isoform_X3_[Amyelois_transitella]
FPKM:4.45 TPM:4.48
826 A_BomoSK_comp10411_c0_seq1
2374bp
 PREDICTED:_mitochondrial_uncoupling_protein_4-like_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006091 P generation of precursor metabolites and energy
GO:0006412 P translation
GO:0006810 P transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:4.26 TPM:4.29
827 A_BomoSK_comp104126_c0_seq1
1316bp
FPKM:4.68 TPM:4.71
828 A_BomoSK_comp10412_c0_seq1
1878bp
FPKM:4.65 TPM:4.68
829 A_BomoSK_comp10413_c0_seq1
209bp
 transcriptional_regulator_[Pseudomonas_sp._RIT288]
FPKM:11.62 TPM:11.68
830 A_BomoSK_comp104145_c0_seq1
785bp
FPKM:2.82 TPM:2.84
831 A_BomoSK_comp10415_c0_seq1
749bp
FPKM:4.31 TPM:4.33
832 A_BomoSK_comp10415_c0_seq2
347bp
FPKM:0.00 TPM:0.00
833 A_BomoSK_comp104165_c0_seq1
3250bp
 hypothetical_protein_RR48_08303_[Papilio_machaon]
FPKM:2.79 TPM:2.80
834 A_BomoSK_comp10416_c0_seq1
397bp
 PREDICTED:_uncharacterized_protein_LOC105381701_[Plutella_xylostella]
FPKM:1.08 TPM:1.08
835 A_BomoSK_comp104171_c0_seq1
357bp
 hypothetical_protein_[Adlercreutzia_equolifaciens]
FPKM:5.98 TPM:6.01
836 A_BomoSK_comp104173_c0_seq1
479bp
 PREDICTED:_glutamate_receptor_2-like,_partial_[Biomphalaria_glabrata]
FPKM:7.15 TPM:7.20
837 A_BomoSK_comp10417_c0_seq1
746bp
 PREDICTED:_U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0007050 P regulation of cell cycle
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
GO:0097193 P intrinsic apoptotic signaling pathway
FPKM:2.23 TPM:2.24
838 A_BomoSK_comp10417_c0_seq2
997bp
 PREDICTED:_U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0007050 P regulation of cell cycle
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
GO:0097193 P intrinsic apoptotic signaling pathway
FPKM:0.58 TPM:0.59
839 A_BomoSK_comp10417_c0_seq3
694bp
 PREDICTED:_U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0007050 P regulation of cell cycle
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
GO:0097193 P intrinsic apoptotic signaling pathway
FPKM:7.25 TPM:7.30
840 A_BomoSK_comp10417_c0_seq4
945bp
 PREDICTED:_U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0007050 P regulation of cell cycle
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
GO:0097193 P intrinsic apoptotic signaling pathway
FPKM:0.91 TPM:0.91
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