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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10417_c0_seq4
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0007050 P regulation of cell cycle
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
GO:0097193 P intrinsic apoptotic signaling pathway
Transcript
Level		FPKM:0.91 TPM:0.91
ORF EntryO_BomoSK7177_5prime_partial:A_BomoSK_comp10417_c0_seq4
Sequence
(Nucleotide)
CCGGCGCCGCCCGCCGCGCACTCGCTGGCCGCGCGGCACTACTCCATCGAGGACAAGACC
TACACGGACGACGACAAGCACGGGCGGCGGGAGCGCGGCTACTCGGGGCCGCTCACCGAC
TTCAGGGAGAAGAGCAACTTCCGCCCGACCGTGAAGTTGGACTACGTGGACGACGACGGG
CGTCCCCTCGCGCCCAAGGAGGCCTTCCGCTACCTGTCGCACAAGTTCCACGGGAAGGGT
CCCGGCAAGAACAAGCAGGAGAAGCGCATCAAGAAGGCCGTGCAGGAGGGGGTCAGTGCC
TCCGACACTCCATTTTATTCTATAGGCAAAGAAATGAAGTTGTCAATAAATAATTTTATG
AATTATTTATTACAAAATATCCAAATTTTCGTTCTTAAGCAAAGTAATTTAAAAGCGAAA
ATGATATTTAAAAAAGAAATAATTTAACGGGAGCTCACCCGCAACACGACGTCAGTCACT
TATTTAATTAGTCAGTTCCACGTTCCCTCGTTCACTGTTTGCCTGTGTCTGCTGCGCCAC
AGCTAATGAAGAAGATGAGCTCGACGGACACTCCGCTGGGCACGCTGCAGATGCTGCAGG
ACAAGCAGCGGGAGACGCGCTCGCCCTACGTGCTGCTCAGCGGCGCCAAGCGTGACGCGC
CACACTAGCACCCCCCCCACATACTTGACGATGCGATGACGATCTAATGTCACATCCAGT
TTGATACCGACTTACAAATTGTAATATCAATTCATAATTAAATCAAATAAAAATATAATG
TGCTCCTGTTTCTTTGATCCTGAGATTGCGCAATTAGCTATAACAAGTGTCCCGGGCAGG
GGACGGGGGGAGACGGAGCCGGGGATCCCCCTGCCTCCGCCCGATAACTGCAAAGAGAAG
TGAATTGTACAATTACATTCATATAAATTGATAAATGTAGTGGAA
(945 bp)

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