SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10405_c0_seq2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_formin-like_protein_12,_partial_[Papilio_machaon]
Ontology
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005938 C cell cortex
GO:0006810 P transport
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007304 P chorion-containing eggshell formation
GO:0007315 P pole plasm assembly
GO:0007316 P pole plasm RNA localization
GO:0008017 F microtubule binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030029 P actin filament-based process
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045010 P actin nucleation
GO:0045451 P pole plasm oskar mRNA localization
GO:0048477 P oogenesis
Transcript
Level		FPKM:5.15 TPM:5.18
ORF EntryO_BomoSK7156_5prime_partial:A_BomoSK_comp10405_c0_seq2
Sequence
(Nucleotide)
TCCACCGCCAATGCAAGGGATGGGTCCACCTCCTCCACCTATGCCAGGCATAACCCCTAT
GCCACCTGCAATGCCAGGTGCACCCCCTCCTCCAGGTATGCCAGGATTGGGGCCTGGTCC
CCCTCCACCACCGCCGACAGGACCAGCACCATTTCCAGCACCTCCTGTAGGTGGTTGGAC
TACACAACGATCAACACTTCGAAAAACCCCAGTGAAACCTGCTGCCCCAATGAAACCTTT
ATATTGGACACGTATTTTAGCTCAACCCAGTATTCCAACATGTCATGGAGAATTAGATTC
TATATTGAAACCACTATGGTTAGAAATTGAAGAAACTAGTTTAGATAATATTGACGAGTT
TACTGATCTATTCTCGCGTCAAGTTATAAAAGCCCCTACCAAAAAGAAAGTGGAAGTCAA
AACGAAAATTCAACCAGTGAAGATTTTGGATAGTAAGAGATCGCAAAATGTCGGAATACT
TGCCCAGAGCTTGCATGTAGAATTTTCAGAGATTGAAAATGCAGTTTACAATTTTGATAC
ATCCGTTGTTAGTTTAGAAGCATTACAGCAAATTTATGAACTGCGGGCCAGTGAAGAAGA
ACTTGCAATGATAAAGGAACATCTAAAATGCAAGCCGGACATACCACTGGATCGCCCAGA
GGCGTTTTTGCACGATTTGTCCGGTATACCGAATTTTGCTGAAAGAATATCGTGTTTTAT
GTTTCAAACTGATTTTGAGGATGCCATAAACACAACCATGCACAAATTAGACAACTTGAA
ACATACATGTGAGTTTCTCATGACTAGTGAATCTCTGAAGAAATTGTTTGCAATTATTTT
AACTCTGGGAAACTACATGAACGGGGGTAACGGACAACGGGGCCAAGCCGATGGATTCGG
CCTAGAAATACTTGCCAAACTAAAAGATGTCAAGTCGAAGCAATCGAACGTGACGTTATT
GCACTTCATAGTTCGCACGTACATGCGTTGTACGGGCGGCGCGTTGTCGGCCACCTGCGT
GCTGCCGGTGCCGGAACCCGGTGACGTCACCCGAGCCGCTGCCATCGACTTTGCCGATGT
CGCTTCGAATTTAACTAATTTAGGAAAACAACTTGACGCCTGCAAAGAAAAAACGAAAAA
GGTAATAGAATCAGATGCTCAATCACGAAATACAAGCAACGAAGAACCCCCTGGGAATAT
GAGTAAGGGTAATCTAGAAGTGTTCAAAGACAAAATGACCACATTCCTAAATGCTGCTGA
AGAGAAACTTAAGACTGAAAACGAAAATTTAGAGGAGTGTCGCAATAAATTTATTGCAAC
AGTAAAATTCTATCAATATTCATCAAAGTGCGGTAAAATAGAGGAATGCGAACCGAAGGA
GTTTTTCTCTCTTTGGACGTCGTTCTGTAGTGATTTCAAGGATATATTTAAGAAAGAAGA
ACAGCTTGCTATAAAAGAAAGATTAAAAGAAACCAGAAAGTTACAGGATGAGAGGAAATC
TCTAACACAGCCCATTAAAGAAGGTGGACTCAAAGCTAGACTGCAAAAACTCTCCAGTTC
TCGAAAATAGCTTTTAAACAATATTTAAAATATTAAAAACCGCTTTAGCTCATATAAATT
TATCAATTGTTACTAAAAGTATAAAATAAAACGTAAAACATTACCCTCATTCAGCTGTCT
GAAAAAAAGGAATATTATGTCAAACTTAGCATTTACGCAATACATTTAAATATATATTTC
ACTATCAACTTTACTGTATATTAAATTATTTAATGTGACAAAGTTCAGCATTCTTATTAC
AAACTTTGATTATACATAAGTATGAGTTTTCTATAAATACTTGTTTTACAGGCCACGAAA
ACATTTCAATAGTGTTCTTATAAATAATAAAAATTAAAAATATAATGTTATAAGATTTGA
CAAAGAACTAAATAAGCTATAAATAAGCCTTGTCCTTCATGCATTCCAAATTAGGCAGAC
TTCAATAGTAATAATAAAAGCATATAAAAATTGTACCTGAACATGCTGTCTAATATCCAT
AGATATTTTTTTTATATAAAAATGGTG
(2067 bp)

- SilkBase 1999-2023 -