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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
781 A_BomoSK_comp10392_c0_seq1
1108bp
 PREDICTED:_uncharacterized_protein_LOC106713896,_partial_[Papilio_machaon]
FPKM:5.13 TPM:5.16
782 A_BomoSK_comp103930_c0_seq1
1412bp
 PREDICTED:_actin_cytoskeleton-regulatory_complex_protein_pan1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
FPKM:5.09 TPM:5.12
783 A_BomoSK_comp10393_c0_seq1
299bp
FPKM:4.49 TPM:4.51
784 A_BomoSK_comp10394_c0_seq1
406bp
 pantetheine-phosphate_adenylyltransferase_[Abiotrophia_defectiva]
FPKM:3.87 TPM:3.89
785 A_BomoSK_comp10394_c1_seq1
253bp
FPKM:2.41 TPM:2.42
786 A_BomoSK_comp10395_c0_seq1
312bp
 PREDICTED:_sterile_alpha_motif_domain-containing_protein_5-like_[Bombyx_mori]
FPKM:0.90 TPM:0.90
787 A_BomoSK_comp10395_c1_seq1
413bp
 PREDICTED:_sterile_alpha_motif_domain-containing_protein_5-like_[Bombyx_mori]
FPKM:2.25 TPM:2.26
788 A_BomoSK_comp10396_c0_seq1
261bp
FPKM:10.91 TPM:10.98
789 A_BomoSK_comp10396_c0_seq2
1903bp
FPKM:7.20 TPM:7.25
790 A_BomoSK_comp103970_c0_seq1
3259bp
 PREDICTED:_uncharacterized_protein_LOC101747229_[Bombyx_mori]
GO:0001164 F RNA polymerase I core promoter sequence-specific DNA binding
GO:0001187 F RNA polymerase I core promoter sequence-specific DNA binding
GO:0001189 P RNA polymerase I preinitiation complex assembly
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005668 C RNA polymerase transcription factor SL1 complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070860 C RNA polymerase I core factor complex
GO:1901838 P positive regulation of transcription of nucleolar large rRNA by RNA polymerase I
FPKM:4.08 TPM:4.10
791 A_BomoSK_comp10397_c0_seq1
281bp
FPKM:3.52 TPM:3.54
792 A_BomoSK_comp10397_c1_seq1
704bp
FPKM:0.65 TPM:0.66
793 A_BomoSK_comp10397_c2_seq1
246bp
FPKM:0.88 TPM:0.88
794 A_BomoSK_comp103984_c0_seq1
860bp
FPKM:3.18 TPM:3.20
795 A_BomoSK_comp10398_c0_seq1
886bp
FPKM:2.25 TPM:2.27
796 A_BomoSK_comp10398_c1_seq1
810bp
 PREDICTED:_protein_SREK1IP1-like_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
FPKM:2.08 TPM:2.09
797 A_BomoSK_comp103990_c0_seq1
1218bp
FPKM:3.33 TPM:3.35
798 A_BomoSK_comp103991_c0_seq1
369bp
FPKM:5.28 TPM:5.31
799 A_BomoSK_comp10399_c0_seq1
244bp
FPKM:4.52 TPM:4.55
800 A_BomoSK_comp10399_c1_seq1
270bp
FPKM:0.66 TPM:0.66
801 A_BomoSK_comp103_c0_seq1
271bp
FPKM:1.95 TPM:1.96
802 A_BomoSK_comp10400_c0_seq1
1085bp
FPKM:3.01 TPM:3.02
803 A_BomoSK_comp10400_c1_seq1
2773bp
 hypothetical_protein_KGM_05562_[Danaus_plexippus]
FPKM:4.87 TPM:4.90
804 A_BomoSK_comp10401_c0_seq1
556bp
FPKM:1.22 TPM:1.23
805 A_BomoSK_comp10401_c1_seq1
377bp
 AGAP002403-PA-like_protein_[Anopheles_sinensis]
FPKM:1.19 TPM:1.20
806 A_BomoSK_comp104026_c0_seq1
1961bp
 PREDICTED:_serine/threonine-protein_kinase_10_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030334 P regulation of cell migration
GO:0031122 P cytoplasmic microtubule organization
GO:0031252 C cell leading edge
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0042981 P regulation of apoptotic process
GO:0046777 P protein autophosphorylation
GO:0051893 P regulation of focal adhesion assembly
GO:0070062 C extracellular exosome
FPKM:4.15 TPM:4.17
807 A_BomoSK_comp104029_c0_seq1
484bp
FPKM:2.47 TPM:2.49
808 A_BomoSK_comp10402_c0_seq1
738bp
 PREDICTED:_uncharacterized_protein_LOC101744165_[Bombyx_mori]
FPKM:5.54 TPM:5.57
809 A_BomoSK_comp10402_c0_seq2
995bp
 PREDICTED:_uncharacterized_protein_LOC101744165_[Bombyx_mori]
FPKM:1.45 TPM:1.46
810 A_BomoSK_comp10403_c0_seq1
847bp
 PREDICTED:_transcription_elongation_factor_SPT5_isoform_X2_[Papilio_machaon]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006354 P DNA-templated transcription, elongation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0016239 P positive regulation of macroautophagy
GO:0019899 F enzyme binding
GO:0032044 C DSIF complex
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0032785 P negative regulation of DNA-templated transcription, elongation
GO:0032786 P positive regulation of DNA-templated transcription, elongation
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1900364 P negative regulation of mRNA polyadenylation
FPKM:6.99 TPM:7.03
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