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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
841 A_BomoSK_comp104183_c0_seq1
516bp
 Condensin-2_complex_subunit_D3_[Papilio_machaon]
FPKM:2.49 TPM:2.50
842 A_BomoSK_comp104183_c0_seq2
516bp
 Condensin-2_complex_subunit_D3_[Papilio_machaon]
FPKM:2.49 TPM:2.50
843 A_BomoSK_comp10418_c0_seq1
564bp
FPKM:0.68 TPM:0.68
844 A_BomoSK_comp10418_c0_seq2
828bp
FPKM:2.06 TPM:2.07
845 A_BomoSK_comp104191_c0_seq1
230bp
FPKM:0.00 TPM:0.00
846 A_BomoSK_comp104195_c0_seq1
367bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:4.71 TPM:4.73
847 A_BomoSK_comp10419_c0_seq1
1516bp
 PREDICTED:_metallophosphoesterase_1_homolog_isoform_X2_[Bombyx_mori]
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0006506 P GPI anchor biosynthetic process
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008081 F phosphoric diester hydrolase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0034235 F GPI anchor binding
GO:0046872 F metal ion binding
GO:0070971 C endoplasmic reticulum exit site
FPKM:0.61 TPM:0.62
848 A_BomoSK_comp10419_c0_seq2
1643bp
 PREDICTED:_metallophosphoesterase_1_homolog_isoform_X2_[Bombyx_mori]
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0006506 P GPI anchor biosynthetic process
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008081 F phosphoric diester hydrolase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0034235 F GPI anchor binding
GO:0046872 F metal ion binding
GO:0070971 C endoplasmic reticulum exit site
FPKM:5.97 TPM:6.00
849 A_BomoSK_comp10419_c1_seq1
498bp
 hypothetical_protein_EMPG_15015_[Emmonsia_parva_UAMH_139]
FPKM:3.81 TPM:3.83
850 A_BomoSK_comp104203_c0_seq1
328bp
 PREDICTED:_cell_division_cycle_2_like-1_isoform_X1_[Bombyx_mori]
FPKM:8.78 TPM:8.83
851 A_BomoSK_comp10420_c0_seq1
1259bp
 PREDICTED:_phospholipase_D2_isoform_X4_[Bombyx_mori]
GO:0002031 P G protein-coupled receptor internalization
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0030334 P regulation of cell migration
GO:0031526 C brush border membrane
GO:0035091 F phosphatidylinositol binding
GO:0036465 P synaptic vesicle recycling
GO:0048017 P inositol lipid-mediated signaling
GO:0048870 P cell motility
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
GO:0098793 C presynapse
FPKM:0.00 TPM:0.00
852 A_BomoSK_comp10420_c0_seq2
1259bp
 PREDICTED:_phospholipase_D2_isoform_X3_[Bombyx_mori]
GO:0002031 P G protein-coupled receptor internalization
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0030334 P regulation of cell migration
GO:0031526 C brush border membrane
GO:0035091 F phosphatidylinositol binding
GO:0036465 P synaptic vesicle recycling
GO:0048017 P inositol lipid-mediated signaling
GO:0048870 P cell motility
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
GO:0098793 C presynapse
FPKM:2.73 TPM:2.74
853 A_BomoSK_comp10420_c1_seq1
556bp
 PREDICTED:_phospholipase_D2_isoform_X4_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006935 P chemotaxis
GO:0007264 P small GTPase mediated signal transduction
GO:0007265 P Ras protein signal transduction
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016324 C apical plasma membrane
GO:0016787 F hydrolase activity
GO:0030139 C endocytic vesicle
GO:0030334 P regulation of cell migration
GO:0031902 C late endosome membrane
GO:0032534 P regulation of microvillus assembly
GO:0035091 F phosphatidylinositol binding
GO:0048017 P inositol lipid-mediated signaling
GO:0048471 C perinuclear region of cytoplasm
GO:0048870 P cell motility
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
FPKM:3.36 TPM:3.38
854 A_BomoSK_comp104218_c0_seq1
819bp
FPKM:4.28 TPM:4.30
855 A_BomoSK_comp10421_c0_seq1
1637bp
 PREDICTED:_longitudinals_lacking_protein,_isoforms_F/I/K/T-like_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007464 P R3/R4 cell fate commitment
GO:0007526 P larval somatic muscle development
GO:0008406 P gonad development
GO:0010906 P regulation of glucose metabolic process
GO:0016199 P axon midline choice point recognition
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0031987 P locomotion involved in locomotory behavior
GO:0035167 P larval lymph gland hemopoiesis
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045467 P R7 cell development
GO:0045476 P nurse cell apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
FPKM:4.19 TPM:4.21
856 A_BomoSK_comp104224_c0_seq1
308bp
 D-hexose-6-phosphate_mutarotase_[Haemophilus_influenzae]
FPKM:1.85 TPM:1.86
857 A_BomoSK_comp10422_c0_seq1
645bp
FPKM:3.81 TPM:3.84
858 A_BomoSK_comp104234_c0_seq1
279bp
 hypothetical_protein_M407DRAFT_193093_[Tulasnella_calospora_MUT_4182]
FPKM:6.59 TPM:6.63
859 A_BomoSK_comp10423_c0_seq1
2807bp
 PREDICTED:_zinc_finger_protein_135-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006359 P regulation of transcription by RNA polymerase III
GO:0046872 F metal ion binding
FPKM:0.94 TPM:0.95
860 A_BomoSK_comp10423_c0_seq2
2855bp
 PREDICTED:_zinc_finger_protein_84-like_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006359 P regulation of transcription by RNA polymerase III
GO:0046872 F metal ion binding
FPKM:3.71 TPM:3.73
861 A_BomoSK_comp1042439_c0_seq1
245bp
 PREDICTED:_uncharacterized_protein_K02A2.6-like_[Amyelois_transitella]
FPKM:0.89 TPM:0.90
862 A_BomoSK_comp10424_c1_seq1
230bp
 hypothetical_protein_AGABI1DRAFT_49392,_partial_[Agaricus_bisporus_var._burnettii_JB137-S8]
FPKM:7.82 TPM:7.87
863 A_BomoSK_comp10425_c0_seq1
1487bp
 PREDICTED:_uncharacterized_protein_LOC107226408_[Neodiprion_lecontei]
FPKM:2.68 TPM:2.70
864 A_BomoSK_comp104260_c0_seq1
1629bp
FPKM:4.37 TPM:4.39
865 A_BomoSK_comp10427_c0_seq1
2092bp
 PREDICTED:_UDP-glucuronic_acid_decarboxylase_1_isoform_X1_[Papilio_polytes]
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0032580 C Golgi cisterna membrane
GO:0033320 P UDP-D-xylose biosynthetic process
GO:0042803 F protein homodimerization activity
GO:0048040 F UDP-glucuronate decarboxylase activity
GO:0051262 P protein tetramerization
GO:0070062 C extracellular exosome
GO:0070403 F NAD+ binding
FPKM:4.78 TPM:4.81
866 A_BomoSK_comp10428_c0_seq1
1612bp
FPKM:7.08 TPM:7.12
867 A_BomoSK_comp10428_c1_seq1
1103bp
FPKM:3.81 TPM:3.83
868 A_BomoSK_comp10429_c0_seq1
259bp
FPKM:1.49 TPM:1.50
869 A_BomoSK_comp10430_c0_seq1
834bp
 PREDICTED:_zinc_finger_protein_GLIS3-like_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016607 C nuclear speck
GO:0031670 P cellular response to nutrient
GO:0042594 P response to starvation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048009 P insulin-like growth factor receptor signaling pathway
FPKM:3.83 TPM:3.85
870 A_BomoSK_comp10430_c0_seq2
660bp
 Zinc_finger_protein_GLIS2-like_protein_[Operophtera_brumata]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016607 C nuclear speck
GO:0031670 P cellular response to nutrient
GO:0042594 P response to starvation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048009 P insulin-like growth factor receptor signaling pathway
FPKM:5.48 TPM:5.51
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