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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
181 A_BomoSK_comp10079_c0_seq2
206bp
FPKM:0.89 TPM:0.89
182 A_BomoSK_comp100809_c0_seq1
378bp
FPKM:0.00 TPM:0.00
183 A_BomoSK_comp100809_c0_seq2
377bp
FPKM:0.89 TPM:0.90
184 A_BomoSK_comp10080_c0_seq1
518bp
FPKM:3.75 TPM:3.77
185 A_BomoSK_comp10080_c1_seq1
601bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_50_[Amyelois_transitella]
FPKM:2.31 TPM:2.33
186 A_BomoSK_comp100814_c0_seq1
1129bp
FPKM:3.94 TPM:3.96
187 A_BomoSK_comp10082_c0_seq1
336bp
FPKM:2.65 TPM:2.66
188 A_BomoSK_comp100832_c0_seq1
1890bp
 cuticular_protein_hypothetical_28_precursor_[Bombyx_mori]
FPKM:4.16 TPM:4.18
189 A_BomoSK_comp10085_c0_seq1
502bp
 PREDICTED:_basic_proline-rich_protein-like_[Amyelois_transitella]
FPKM:5.72 TPM:5.75
190 A_BomoSK_comp10085_c0_seq2
631bp
 PREDICTED:_basic_proline-rich_protein-like_[Amyelois_transitella]
FPKM:1.05 TPM:1.05
191 A_BomoSK_comp100861_c0_seq1
842bp
FPKM:2.75 TPM:2.77
192 A_BomoSK_comp10086_c0_seq1
253bp
FPKM:1.60 TPM:1.61
193 A_BomoSK_comp100875_c0_seq1
680bp
FPKM:3.66 TPM:3.68
194 A_BomoSK_comp10087_c0_seq1
401bp
 hypothetical_protein_[Dokdonia_sp._MED134]
FPKM:3.17 TPM:3.19
195 A_BomoSK_comp100884_c0_seq1
1019bp
 PREDICTED:_uncharacterized_protein_LOC106713442_[Papilio_machaon]
FPKM:5.88 TPM:5.92
196 A_BomoSK_comp10088_c0_seq1
3384bp
 PREDICTED:_calpain-A_isoform_X2_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
FPKM:23.07 TPM:23.20
197 A_BomoSK_comp10088_c0_seq2
3457bp
 PREDICTED:_calpain-A_isoform_X2_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
FPKM:1.79 TPM:1.80
198 A_BomoSK_comp10088_c0_seq3
3435bp
 PREDICTED:_calpain-A_isoform_X2_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
FPKM:5.41 TPM:5.44
199 A_BomoSK_comp100899_c0_seq1
1319bp
FPKM:3.73 TPM:3.75
200 A_BomoSK_comp10089_c0_seq1
1961bp
 PREDICTED:_aarF_domain-containing_protein_kinase_4_[Bombyx_mori]
GO:0004674 F protein serine/threonine kinase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0031966 C mitochondrial membrane
GO:0032836 P glomerular basement membrane development
GO:0072015 P glomerular visceral epithelial cell development
FPKM:2.29 TPM:2.30
201 A_BomoSK_comp10089_c0_seq2
2235bp
 PREDICTED:_aarF_domain-containing_protein_kinase_4_[Bombyx_mori]
GO:0004674 F protein serine/threonine kinase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0031966 C mitochondrial membrane
GO:0032836 P glomerular basement membrane development
GO:0072015 P glomerular visceral epithelial cell development
FPKM:4.41 TPM:4.44
202 A_BomoSK_comp1008_c0_seq1
582bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:1.86 TPM:1.87
203 A_BomoSK_comp100902_c0_seq1
732bp
 PREDICTED:_methionyl-tRNA_formyltransferase,_mitochondrial_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004479 F methionyl-tRNA formyltransferase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0016742 F hydroxymethyl-, formyl- and related transferase activity
GO:0070124 P mitochondrial translational initiation
GO:0071951 P conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
FPKM:4.03 TPM:4.05
204 A_BomoSK_comp10090_c0_seq1
222bp
 PREDICTED:_transient_receptor_potential_cation_channel_trpm_isoform_X2_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007005 P mitochondrion organization
GO:0010960 P magnesium ion homeostasis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016049 P cell growth
GO:0034220 P ion transmembrane transport
GO:0034703 C cation channel complex
GO:0043052 P thermotaxis
GO:0046873 F metal ion transmembrane transporter activity
GO:0051262 P protein tetramerization
GO:0055069 P zinc ion homeostasis
GO:0055085 P transmembrane transport
GO:0070838 P metal ion transport
GO:0097682 F intracellular phosphatidylinositol-3,5-bisphosphate-sensitive cation channel activity
GO:0098655 P cation transmembrane transport
FPKM:5.13 TPM:5.16
205 A_BomoSK_comp10090_c0_seq2
1040bp
 PREDICTED:_transient_receptor_potential_cation_channel_trpm_isoform_X2_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007005 P mitochondrion organization
GO:0010960 P magnesium ion homeostasis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016049 P cell growth
GO:0034220 P ion transmembrane transport
GO:0034703 C cation channel complex
GO:0043052 P thermotaxis
GO:0046873 F metal ion transmembrane transporter activity
GO:0051262 P protein tetramerization
GO:0055069 P zinc ion homeostasis
GO:0055085 P transmembrane transport
GO:0070838 P metal ion transport
GO:0097682 F intracellular phosphatidylinositol-3,5-bisphosphate-sensitive cation channel activity
GO:0098655 P cation transmembrane transport
FPKM:2.44 TPM:2.45
206 A_BomoSK_comp10091_c0_seq1
886bp
FPKM:6.36 TPM:6.40
207 A_BomoSK_comp100928_c0_seq1
508bp
FPKM:0.53 TPM:0.53
208 A_BomoSK_comp10092_c0_seq1
652bp
 ubiquitin_ligase_E3_alpha_[Anopheles_sinensis]
FPKM:6.06 TPM:6.09
209 A_BomoSK_comp10092_c0_seq2
641bp
 PREDICTED:_uncharacterized_protein_LOC106115327_[Papilio_xuthus]
FPKM:6.95 TPM:6.99
210 A_BomoSK_comp10093_c0_seq1
1591bp
 PREDICTED:_septin-7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003779 F actin binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005940 C septin ring
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0031105 C septin complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032154 C cleavage furrow
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045171 C intercellular bridge
GO:0045172 C germline ring canal
GO:0051301 P cell division
GO:0070938 C contractile ring
FPKM:4.75 TPM:4.78
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