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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
211 A_BomoSK_comp10093_c0_seq2
2011bp
 PREDICTED:_septin-7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003779 F actin binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005940 C septin ring
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0031105 C septin complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032154 C cleavage furrow
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045171 C intercellular bridge
GO:0045172 C germline ring canal
GO:0051301 P cell division
GO:0070938 C contractile ring
FPKM:2.97 TPM:2.99
212 A_BomoSK_comp10094_c0_seq1
1377bp
 PREDICTED:_uncharacterized_protein_LOC106137937_[Amyelois_transitella]
FPKM:6.38 TPM:6.42
213 A_BomoSK_comp10095_c0_seq1
223bp
FPKM:5.04 TPM:5.07
214 A_BomoSK_comp100967_c0_seq1
1469bp
 PREDICTED:_inositol-3-phosphate_synthase_[Amyelois_transitella]
GO:0004512 F inositol-3-phosphate synthase activity
GO:0005737 C cytoplasm
GO:0006021 P inositol biosynthetic process
GO:0006629 P lipid metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016853 F isomerase activity
FPKM:2.85 TPM:2.87
215 A_BomoSK_comp100968_c0_seq1
601bp
 PREDICTED:_histone-lysine_N-methyltransferase_2D-like,_partial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035097 C histone methyltransferase complex
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044666 C MLL3/4 complex
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051568 P histone H3-K4 methylation
FPKM:5.45 TPM:5.48
216 A_BomoSK_comp10096_c0_seq1
230bp
FPKM:3.35 TPM:3.37
217 A_BomoSK_comp10096_c0_seq2
336bp
FPKM:0.00 TPM:0.00
218 A_BomoSK_comp10097_c0_seq1
291bp
FPKM:2.67 TPM:2.69
219 A_BomoSK_comp100984_c0_seq1
3575bp
 PREDICTED:_DNA-directed_RNA_polymerase_III_subunit_rpc2_[Amyelois_transitella]
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0032549 F ribonucleoside binding
GO:0046872 F metal ion binding
FPKM:4.00 TPM:4.02
220 A_BomoSK_comp10098_c0_seq1
1236bp
 putative_enhancer_of_zeste_2_isoform_a_[Danaus_plexippus]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006723 P cuticle hydrocarbon biosynthetic process
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007517 P muscle organ development
GO:0008168 F methyltransferase activity
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0022008 P neurogenesis
GO:0032259 P methylation
GO:0035097 C histone methyltransferase complex
GO:0035098 C ESC/E(Z) complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0042054 F histone methyltransferase activity
GO:0042810 P pheromone metabolic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0048813 P dendrite morphogenesis
GO:0051567 P histone H3-K9 methylation
GO:0070734 P histone H3-K27 methylation
FPKM:7.61 TPM:7.66
221 A_BomoSK_comp100999_c0_seq1
3983bp
 PREDICTED:_uncharacterized_protein_LOC101740831_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001568 P blood vessel development
GO:0001948 F protein binding
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006469 P negative regulation of protein kinase activity
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0009967 P positive regulation of signal transduction
GO:0016020 C membrane
GO:0030097 P hemopoiesis
GO:0030154 P cell differentiation
GO:0042100 P B cell proliferation
GO:0045624 P positive regulation of T-helper cell differentiation
GO:0045931 P positive regulation of mitotic cell cycle
GO:0048514 P blood vessel morphogenesis
GO:0050852 P T cell receptor signaling pathway
GO:0071425 P hematopoietic stem cell proliferation
GO:1900194 P negative regulation of oocyte maturation
FPKM:2.63 TPM:2.65
222 A_BomoSK_comp100_c0_seq1
230bp
FPKM:1.12 TPM:1.12
223 A_BomoSK_comp10100_c0_seq1
926bp
 PREDICTED:_RNA-binding_protein_48_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005654 C nucleoplasm
FPKM:3.43 TPM:3.45
224 A_BomoSK_comp10101_c0_seq1
354bp
 PREDICTED:_histone-lysine_N-methyltransferase_SETMAR-like_[Camponotus_floridanus]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:1.69 TPM:1.70
225 A_BomoSK_comp10101_c1_seq1
321bp
 hypothetical_protein_SOVF_110320_[Spinacia_oleracea]
FPKM:0.42 TPM:0.42
226 A_BomoSK_comp101026_c0_seq1
1573bp
 PREDICTED:_ATP-dependent_DNA_helicase_PIF1-like_[Athalia_rosae]
FPKM:4.83 TPM:4.85
227 A_BomoSK_comp10102_c0_seq1
438bp
 hypothetical_protein_SPBR_07788_[Sporothrix_brasiliensis_5110]
FPKM:6.53 TPM:6.56
228 A_BomoSK_comp10102_c0_seq2
1395bp
FPKM:2.70 TPM:2.72
229 A_BomoSK_comp101034_c0_seq1
367bp
 PREDICTED:_uncharacterized_protein_LOC101738802_[Bombyx_mori]
FPKM:5.96 TPM:6.00
230 A_BomoSK_comp10103_c0_seq1
720bp
 PREDICTED:_alpha-ketoglutarate-dependent_dioxygenase_alkB_homolog_7,_mitochondrial_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006631 P fatty acid metabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0010883 P regulation of lipid storage
GO:0012501 P programmed cell death
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:1902445 P regulation of mitochondrial membrane permeability involved in programmed necrotic cell death
FPKM:5.07 TPM:5.10
231 A_BomoSK_comp10104_c0_seq1
576bp
FPKM:8.62 TPM:8.67
232 A_BomoSK_comp10104_c1_seq1
235bp
FPKM:7.22 TPM:7.27
233 A_BomoSK_comp10105_c0_seq1
3146bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_isoform_X32_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
FPKM:5.54 TPM:5.58
234 A_BomoSK_comp101067_c0_seq1
1291bp
 uncharacterized_protein_LOC106117767_precursor_[Papilio_xuthus]
FPKM:4.69 TPM:4.71
235 A_BomoSK_comp10106_c0_seq1
1282bp
 PREDICTED:_rho_GTPase-activating_protein_26_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0007165 P signal transduction
GO:0030036 P actin cytoskeleton organization
GO:0030054 C cell junction
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
FPKM:3.70 TPM:3.72
236 A_BomoSK_comp101072_c0_seq1
234bp
FPKM:5.24 TPM:5.27
237 A_BomoSK_comp101077_c0_seq1
409bp
FPKM:6.11 TPM:6.14
238 A_BomoSK_comp101079_c0_seq1
352bp
FPKM:6.84 TPM:6.88
239 A_BomoSK_comp10107_c0_seq1
343bp
FPKM:1.45 TPM:1.45
240 A_BomoSK_comp10108_c0_seq1
2053bp
 PREDICTED:_transcription_factor_Dp-1_isoform_X1_[Amyelois_transitella]
GO:0000278 P mitotic cell cycle
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0007049 P cell cycle
GO:0008134 F transcription factor binding
GO:0008283 P cell population proliferation
GO:0019904 F protein domain specific binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070345 P negative regulation of fat cell proliferation
GO:1900740 P positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway
FPKM:23.31 TPM:23.45
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