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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
151 A_BomoSK_comp10063_c0_seq1
2184bp
 PREDICTED:_uncharacterized_protein_LOC106132143_[Amyelois_transitella]
GO:0000070 P mitotic sister chromatid segregation
GO:0003674 F molecular_function
GO:0003924 F GTPase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0008152 P metabolic process
GO:0090307 P mitotic spindle assembly
FPKM:5.12 TPM:5.15
152 A_BomoSK_comp100648_c0_seq1
990bp
FPKM:3.36 TPM:3.38
153 A_BomoSK_comp100649_c0_seq1
667bp
 PREDICTED:_leucine-zipper-like_transcriptional_regulator_1_[Amyelois_transitella]
GO:0003700 F DNA-binding transcription factor activity
GO:0005794 C Golgi apparatus
GO:0006355 P regulation of transcription, DNA-templated
GO:0009653 P anatomical structure morphogenesis
FPKM:4.93 TPM:4.96
154 A_BomoSK_comp10064_c0_seq1
672bp
 seminal_fluid_protein_CSSFP066_[Chilo_suppressalis]
FPKM:1.74 TPM:1.75
155 A_BomoSK_comp10064_c1_seq1
263bp
 seminal_fluid_protein_CSSFP066_[Chilo_suppressalis]
FPKM:1.42 TPM:1.43
156 A_BomoSK_comp100668_c0_seq1
1884bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-2_homolog_[Papilio_polytes]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:4.01 TPM:4.03
157 A_BomoSK_comp10066_c0_seq1
1918bp
FPKM:4.77 TPM:4.80
158 A_BomoSK_comp100673_c0_seq1
289bp
FPKM:11.43 TPM:11.50
159 A_BomoSK_comp10067_c0_seq1
6856bp
 PREDICTED:_histone-lysine_N-methyltransferase_2C-like_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035097 C histone methyltransferase complex
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044666 C MLL3/4 complex
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051568 P histone H3-K4 methylation
FPKM:5.82 TPM:5.85
160 A_BomoSK_comp10067_c0_seq2
6894bp
 PREDICTED:_histone-lysine_N-methyltransferase_2C-like_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035097 C histone methyltransferase complex
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044666 C MLL3/4 complex
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051568 P histone H3-K4 methylation
FPKM:0.63 TPM:0.63
161 A_BomoSK_comp100695_c0_seq1
1549bp
 PREDICTED:_tyrosine-protein_phosphatase_non-receptor_type_4_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0008092 F cytoskeletal protein binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
FPKM:4.58 TPM:4.61
162 A_BomoSK_comp1006_c0_seq1
334bp
FPKM:0.77 TPM:0.77
163 A_BomoSK_comp10070_c0_seq1
2865bp
 hypothetical_protein_KGM_04775_[Danaus_plexippus]
GO:0000339 F RNA cap binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005846 C nuclear cap binding complex
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016070 P RNA metabolic process
GO:0031047 P gene silencing by RNA
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0051028 P mRNA transport
FPKM:7.59 TPM:7.64
164 A_BomoSK_comp100717_c0_seq1
790bp
FPKM:4.95 TPM:4.98
165 A_BomoSK_comp10071_c0_seq1
2196bp
 PREDICTED:_ATP-dependent_RNA_helicase_DHX8_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
FPKM:8.11 TPM:8.16
166 A_BomoSK_comp10072_c0_seq1
1641bp
 60S_ribosomal_export_protein_NMD3_[Papilio_xuthus]
GO:0000055 P ribosomal large subunit export from nucleus
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0015031 P protein transport
GO:0043023 F ribosomal large subunit binding
FPKM:7.31 TPM:7.35
167 A_BomoSK_comp100738_c0_seq1
878bp
 PREDICTED:_myotubularin-related_protein_5_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0001691 F pseudophosphatase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0007283 P spermatogenesis
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0019208 F phosphatase regulator activity
GO:0043086 P negative regulation of catalytic activity
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
FPKM:5.38 TPM:5.41
168 A_BomoSK_comp10073_c0_seq1
446bp
 hypothetical_protein_TgIb.1620_[Toxoplasma_gondii_RH]
FPKM:11.78 TPM:11.84
169 A_BomoSK_comp10073_c0_seq2
236bp
FPKM:3.05 TPM:3.07
170 A_BomoSK_comp100741_c0_seq1
506bp
FPKM:7.43 TPM:7.47
171 A_BomoSK_comp1007424_c0_seq1
228bp
 PREDICTED:_putative_inorganic_phosphate_cotransporter_[Papilio_xuthus]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
FPKM:2.31 TPM:2.32
172 A_BomoSK_comp10074_c0_seq1
575bp
 putative_phosphatidylinositol-4-phosphate_5-kinase,_type_II,_beta_isoform_1,_partial_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0007166 P cell surface receptor signaling pathway
GO:0010506 P regulation of autophagy
GO:0014066 P regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016307 F phosphatidylinositol phosphate kinase activity
GO:0016308 F 1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0016309 F 1-phosphatidylinositol-5-phosphate 4-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046488 P phosphatidylinositol metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0052811 F 1-phosphatidylinositol-3-phosphate 4-kinase activity
GO:2000786 P positive regulation of autophagosome assembly
FPKM:0.92 TPM:0.93
173 A_BomoSK_comp10074_c0_seq2
700bp
 PREDICTED:_phosphatidylinositol_5-phosphate_4-kinase_type-2_beta_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016307 F phosphatidylinositol phosphate kinase activity
GO:0016309 F 1-phosphatidylinositol-5-phosphate 4-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046488 P phosphatidylinositol metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
FPKM:1.95 TPM:1.97
174 A_BomoSK_comp10074_c0_seq3
1088bp
 PREDICTED:_phosphatidylinositol_5-phosphate_4-kinase_type-2_alpha_isoform_X4_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016307 F phosphatidylinositol phosphate kinase activity
GO:0016309 F 1-phosphatidylinositol-5-phosphate 4-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046488 P phosphatidylinositol metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
FPKM:6.61 TPM:6.65
175 A_BomoSK_comp10075_c0_seq1
221bp
Uncharacterised_protein_[Mycobacterium_tuberculosis]
FPKM:3.92 TPM:3.94
176 A_BomoSK_comp100761_c0_seq1
1188bp
FPKM:3.71 TPM:3.73
177 A_BomoSK_comp10076_c0_seq1
1721bp
 PREDICTED:_E3_ubiquitin-protein_ligase_RNF34_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002020 F protease binding
GO:0002039 F p53 binding
GO:0002947 C tumor necrosis factor receptor superfamily complex
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0010762 P regulation of fibroblast migration
GO:0010804 P negative regulation of tumor necrosis factor-mediated signaling pathway
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019901 F protein kinase binding
GO:0031625 F ubiquitin protein ligase binding
GO:0032006 P regulation of TOR signaling
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0055038 C recycling endosome membrane
GO:0061630 F ubiquitin protein ligase activity
GO:0070936 P protein K48-linked ubiquitination
GO:1901797 P negative regulation of signal transduction by p53 class mediator
GO:1902042 P negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2001271 P negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis
FPKM:7.55 TPM:7.59
178 A_BomoSK_comp10077_c0_seq1
2146bp
FPKM:3.64 TPM:3.66
179 A_BomoSK_comp10078_c0_seq1
645bp
 hypothetical_protein_KGM_05400_[Danaus_plexippus]
FPKM:1.97 TPM:1.98
180 A_BomoSK_comp10079_c0_seq1
206bp
FPKM:0.89 TPM:0.89
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