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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10088_c0_seq2
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_calpain-A_isoform_X2_[Bombyx_mori]
Ontology
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:1.79 TPM:1.80
ORF EntryO_BomoSK6743_complete:A_BomoSK_comp10088_c0_seq2
Sequence
(Nucleotide)
AGATCTTGACAACTACCGAGTTCTCGAATGAGTCGGTTGTATCACTGTCAGTTGAAAGGC
CTGTGTTTTTGGGTACGGTCATATTATTATTAAAACTTAAAATTTCACGTAATTTAATAT
ATTGTGAGTGGAAATTATACTTGAATTAATCCAAGATGTCTTAGCGAACAATAAAGGAAC
TTAGTGAGTAGTAGTGAAAGTGCGCGAGCTTGCTATGGCAGGCCAAAATGGCGGTGGGAA
TTTTGGCGCCCTTATACAGGGCGCGGGAAAACAGTTGCTTAATCAAGGAGGCCAGGCTCT
ACTGAATTATGGTGCTCAAGCCCTCGGGAACATCATTAATGAGGTGTTCCAGAAGAAAGA
GGTTGAACAGAAAAGGTTTCTGCCCAGTATCAAGAATTATAAAGTGCTAGGCGAAACCCG
CCCGTCATCATTCGGTCCGGCTACGTATCAGGACTTCAAAGACATAAGATCGCGGTGCCT
AGCTGAAGGTAGACTCTTCGAAGACCCCGAGTTTCCGGCCGTGGACCGCAGCCTCTACTA
CAAGGAGAGCCTGGACAGGCCCATCACTTGGCTCAGACCTGGGGAAATCAGCGACAACCC
TCAACTTTTCGTCGAAGGCTACAGTCGCTTCGACGTCCAACAAGGAGAGTTGGGCGATTG
TTGGCTGTTGGCTGCCGTTGCCAACTTGACACTTCATCGCAAGTTATTCTTCCAAGTTGT
ACCTGATGATCAGAGTTTCGATGAAGATTATGCGGGCGTCTTCCATTTCCGTTTCTGGCA
GTACGGGCGCTGGGTGGACGTGGTCATCGACGACCGTCTCCCAACGTACCGAGGGAAACT
GGTGTTCCTCCACTCGGCCGAGGCGAACGAGTTCTGGAGTGCTCTACTCGAGAAGGCATA
TGCGAAACTCCACGGATCGTACGAAGCCCTCAAGGGAGGCTCGACCTGCGAGGCCATGGA
GGACTTCACCGGCGGCGTCACCGAAATGTACGAGATGTCCGAACTGCCGCCAAACTTCTA
CACGATCCTGCTGAAGGCGTACGAGAGGAACTCTCTTATGGGCTGCAGTATTGAGCCCGA
CCCCCACATCCTCGAGGCGGAGACTCCGGCGGGGCTCATCCGGGGGCACGCGTACTCCGT
GACCCGGGTCAAGTACGTGGACATCGAGACGCCGGGCCGCGCCGGCAAGATCCCGCTGCT
CCGCCTGCGCAACCCCTGGGGGAACGAGGCCGAGTGGAACGGACCTTGGAGCGACAAGTC
TCCAGAGTGGCGCTACATCCCGGAGTCGGAGAAGGAGGAGCTCGGCCTGACGTTCGACGA
CGACGGCGAGTTCTGGATGTCGTTCAAGGACTTCGTCAACCACTTCTCGCGAGTGGAGAT
ATGCAACTTGAACCCCGACTCTCTGGACCCCGAGGAGTGTCCCGAGGGCTGCACCAAGAA
GTGGGAGATGTCGGTCTTCGAAGGCGAATGGGTTAGAGGCGTGACGGCCGGCGGCTGCAG
GAACTTCCTGGAGACGTTCTGGCGGAACCCTCAGTACACCGTCACGTTGAGCGACCCCGA
CGAAGGAGACGACGAGAACAAATGTACCATAATCGTGGCGCTGATGCAGAAGAACCGTCG
CTCGCAGCGCCACCAGGGCCTGGAGTGCCTCACCATCGGGTTCGCGGTGTACCGCCTCCC
GGACTACGGGCACGTGCCCAAGCCGCTCGACGTCAACTTCTTCAAGTACAACGCGTCCGT
CGGCAGGTCGCAGGCCTTCATCAACTTGAGGGAGGTCAGCGCCAGATTCAAGTTCGAGCC
CGGCTCGTACGTGATAGTGCCCTCGACCTTCGACCCTGACGAGGAGGGAGAGTTCTTACT
AAGAGTCTTCTCCGAAAAGGACAACAATATGGCTGAGAATGACGAGGACATCGGTATGGG
CGATGTTGACGACAGAGTGAAGGAGCTGGCGCCGGACCCGGAGCCGGCCGACCCGGTCCG
TGAGTTCTTCACGCGGCTCGCCGGCTCCGACGGGGAGGTCGACTGGCAGGAACTCAAGGA
GATCTTGGACTACGCCATGAGGGAAGAACTTGCGATGCGGCACGGCGCATACGACGGGGG
CGGCGGGGTCGCGGGCGGGGGGCCCTCCCCCCGGACCCCGCTCGGCCCCCCCGGCGGCCC
CCCTCAGGAACAGAGCTGCCTCGAGCAAATCCTGTGCGCTCTCTGCACCCCTATATGCAA
GGAGCTCGGCGTGGACCTGCAGCAAGCTCAGAACCAACCGGAGCAGGTGCATTTGAACCA
GCCGCAGCCCTACGCCAACGCTCAAGAGTTGCAAGGTCAGGGTTTCTCCAAGGACGTCTG
CCGTAGCATGATCGCGATGCTTGACAAGGACGGCTCCGGAGGACTTGGCTTCGAAGAGTT
CAAGTCCCTGTGGATCGATCTGCGCAACTGGAGGGCCGTGTTCCGCCTGTACGACGTGGA
GCGGCGGGGGGCCGTCCCCGCCAGCCACCTGCGTGACGCTCTGCACTCGGCCGGCTACAC
GGTCAACGCACACGTGCTCAACGTGCTGGCGCACAGATACGGCACCACCGACGGGTACAT
ACAGTTCGATGACTTCATAATGTGCGCCGTGCGTCTCAAGACCATGATCGCAAACGGCGA
GCCGTTGGAGAACCTCGAACGTGAACTGCAGCAGGCGCCCTGAGACGGAGCCCGGAGCGC
CCTCTTGTAATCACAAACACACGTTCAACTCTCGATCTTCGGGCGGAGACTACGCCACCT
TCTCGCTCGAGGAGTGGCTGAATCGCACAGTATACTCGTAAGCGGAACCGAACCTCCTTA
ACATCGACCGGCCTGCATGCTGGATCCCGTCTACACTACTACATCGTATTTAAAAAAAAA
AAACTGTCACTGTCAGTTTTGAAAATTGTAAACTTCAAATTTGACAGTTCGAAAAAAGAA
AACGAAAAAATACACGTCCTTTCAATTTTATTTGTGCAAAAAAATAAAATACAATTTCTA
TCCGAAGTATATTACGAAGATAGATAATCTCTGCCTTATATTTATAGAATATAATATGTA
TATTTTTAATATTTATAGTTATAAAAAAAAAACAAAAATCTAAGTGTTCATAATTCGCTT
GATGTATAACGGAAATTGATCTTTTGAGACGACGCCGCTTACCGTCGGGTGCGCTGTACG
CTCGCCGCCACGCTCAATGTCACTCTGTCATCAATTTTAATATAAACTCATAATACAGTA
GGTCCACCCGCATCGGTACCGCCTACCCACTTCTGTATGTATAAAGAGTGGGATATTCAC
GATAAAACAGCATTGAGACTACGACCTCATGTCTCAAGCTCTACGTCACGTTGTGACGTC
CATCTGTTCCGGCTTTGCATCAGATGAGCTGGTATTGCAAGAACCAAACCTTCAAGGCTT
GCGGAGAGTGCTGTCATAAGTAATCATCAGCGGTCTA
(3457 bp)

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