SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10088_c0_seq3
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_calpain-A_isoform_X2_[Bombyx_mori]
Ontology
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:5.41 TPM:5.44
ORF EntryO_BomoSK6746_complete:A_BomoSK_comp10088_c0_seq3
Sequence
(Nucleotide)
AGATCTTGACAACTACCGAGTTCTCGAATGAGTCGGTTGTATCACTGTCAGTTGAAAGGC
CTGTGTTTTTGGGTACGGTCATATTATTATTAAAACTTAAAATTTCACGTAATTTAATAT
ATTTTAATCCAAGATGTCTTAGCGAACAATAAAGGAACTTAGTGAGTAGTAGTGAAAGTG
CGCGAGCTTGCTATGGCAGGCCAAAATGGCGGTGGGAATTTTGGCGCCCTTATACAGGGC
GCGGGAAAACAGTTGCTTAATCAAGGAGGCCAGGCTCTACTGAATTATGGTGCTCAAGCC
CTCGGGAACATCATTAATGAGGTGTTCCAGAAGAAAGAGGTTGAACAGAAAAGGTTTCTG
CCCAGTATCAAGAATTATAAAGTGCTAGGCGAAACCCGCCCGTCATCATTCGGTCCGGCT
ACGTATCAGGACTTCAAAGACATAAGATCGCGGTGCCTAGCTGAAGGTAGACTCTTCGAA
GACCCCGAGTTTCCGGCCGTGGACCGCAGCCTCTACTACAAGGAGAGCCTGGACAGGCCC
ATCACTTGGCTCAGACCTGGGGAAATCAGCGACAACCCTCAACTTTTCGTCGAAGGCTAC
AGTCGCTTCGACGTCCAACAAGGAGAGTTGGGCGATTGTTGGCTGTTGGCTGCCGTTGCC
AACTTGACACTTCATCGCAAGTTATTCTTCCAAGTTGTACCTGATGATCAGAGTTTCGAT
GAAGATTATGCGGGCGTCTTCCATTTCCGTTTCTGGCAGTACGGGCGCTGGGTGGACGTG
GTCATCGACGACCGTCTCCCAACGTACCGAGGGAAACTGGTGTTCCTCCACTCGGCCGAG
GCGAACGAGTTCTGGAGTGCTCTACTCGAGAAGGCATATGCGAAACTCCACGGATCGTAC
GAAGCCCTCAAGGGAGGCTCGACCTGCGAGGCCATGGAGGACTTCACCGGCGGCGTCACC
GAAATGTACGAGATGTCCGAACTGCCGCCAAACTTCTACACGATCCTGCTGAAGGCGTAC
GAGAGGAACTCTCTTATGGGCTGCAGTATTGAGCCCGACCCCCACATCCTCGAGGCGGAG
ACTCCGGCGGGGCTCATCCGGGGGCACGCGTACTCCGTGACCCGGGTCAAGTACGTGGAC
ATCGAGACGCCGGGCCGCGCCGGCAAGATCCCGCTGCTCCGCCTGCGCAACCCCTGGGGG
AACGAGGCCGAGTGGAACGGACCTTGGAGCGACAAGTCTCCAGAGTGGCGCTACATCCCG
GAGTCGGAGAAGGAGGAGCTCGGCCTGACGTTCGACGACGACGGCGAGTTCTGGATGTCG
TTCAAGGACTTCGTCAACCACTTCTCGCGAGTGGAGATATGCAACTTGAACCCCGACTCT
CTGGACCCCGAGGAGTGTCCCGAGGGCTGCACCAAGAAGTGGGAGATGTCGGTCTTCGAA
GGCGAATGGGTTAGAGGCGTGACGGCCGGCGGCTGCAGGAACTTCCTGGAGACGTTCTGG
CGGAACCCTCAGTACACCGTCACGTTGAGCGACCCCGACGAAGGAGACGACGAGAACAAA
TGTACCATAATCGTGGCGCTGATGCAGAAGAACCGTCGCTCGCAGCGCCACCAGGGCCTG
GAGTGCCTCACCATCGGGTTCGCGGTGTACCGCCTCCCGGACTACGGGCACGTGCCCAAG
CCGCTCGACGTCAACTTCTTCAAGTACAACGCGTCCGTCGGCAGGTCGCAGGCCTTCATC
AACTTGAGGGAGGTCAGCGCCAGATTCAAGTTCGAGCCCGGCTCGTACGTGATAGTGCCC
TCGACCTTCGACCCTGACGAGGAGGGAGAGTTCTTACTAAGAGTCTTCTCCGAAAAGGAC
AACAATATGGCTGAGAATGACGAGGACATCGGTATGGGCGATGTTGACGACAGAGTGAAG
GAGCTGGCGCCGGACCCGGAGCCGGCCGACCCGGTCCGTGAGTTCTTCACGCGGCTCGCC
GGCTCCGACGGGGAGGTCGACTGGCAGGAACTCAAGGAGATCTTGGACTACGCCATGAGG
GAAGAACTTGCGATGCGGCACGGCGCATACGACGGGGGCGGCGGGGTCGCGGGCGGGGGG
CCCTCCCCCCGGACCCCGCTCGGCCCCCCCGGCGGCCCCCCTCAGGAACAGAGCTGCCTC
GAGCAAATCCTGTGCGCTCTCTGCACCCCTATATGCAAGGAGCTCGGCGTGGACCTGCAG
CAAGCTCAGAACCAACCGGAGCAGGTGCATTTGAACCAGCCGCAGCCCTACGCCAACGCT
CAAGAGTTGCAAGGTCAGGGTTTCTCCAAGGACGTCTGCCGTAGCATGATCGCGATGCTT
GACAAGGACGGCTCCGGAGGACTTGGCTTCGAAGAGTTCAAGTCCCTGTGGATCGATCTG
CGCAACTGGAGGGCCGTGTTCCGCCTGTACGACGTGGAGCGGCGGGGGGCCGTCCCCGCC
AGCCACCTGCGTGACGCTCTGCACTCGGCCGGCTACACGGTCAACGCACACGTGCTCAAC
GTGCTGGCGCACAGATACGGCACCACCGACGGGTACATACAGTTCGATGACTTCATAATG
TGCGCCGTGCGTCTCAAGACCATGATCGCAAACGGCGAGCCGTTGGAGAACCTCGAACGT
GAACTGCAGCAGGCGCCCTGAGACGGAGCCCGGAGCGCCCTCTTGTAATCACAAACACAC
GTTCAACTCTCGATCTTCGGGCGGAGACTACGCCACCTTCTCGCTCGAGGAGTGGCTGAA
TCGCACAGTATACTCGTAAGCGGAACCGAACCTCCTTAACATCGACCGGCCTGCATGCTG
GATCCCGTCTACACTACTACATCGTATTTAAAAAAAAAAAACTGTCACTGTCAGTTTTGA
AAATTGTAAACTTCAAATTTGACAGTTCGAAAAAAGAAAACGAAAAAATACACGTCCTTT
CAATTTTATTTGTGCAAAAAAATAAAATACAATTTCTATCCGAAGTATATTACGAAGATA
GATAATCTCTGCCTTATATTTATAGAATATAATATGTATATTTTTAATATTTATAGTTAT
AAAAAAAAAACAAAAATCTAAGTGTTCATAATTCGCTTGATGTATAACGGAAATTGATCT
TTTGAGACGACGCCGCTTACCGTCGGGTGCGCTGTACGCTCGCCGCCACGCTCAATGTCA
CTCTGTCATCAATTTTAATATAAACTCATAATACAGTAGGTCCACCCGCATCGGTACCGC
CTACCCACTTCTGTATGTATAAAGAGTGGGATATTCACGATAAAACAGCATTGAGACTAC
GACCTCATGTCTCAAGCTCTACGTCACGTTGTGACGTCCATCTGTTCCGGCTTTGCATCA
GATGAGCTGGTATTGCAAGAACCAAACCTTCAAGGCTTGCGGAGAGTGCTGTCATAAGTA
ATCATCAGCGGTCTA
(3435 bp)

- SilkBase 1999-2023 -