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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
841 A_BomaMG_comp11219_c0_seq1
236bp
FPKM:0.00 TPM:0.00
842 A_BomaMG_comp1121_c0_seq1
316bp
2-oxoglutarate_ferredoxin_oxidoreductase_subunit_alpha_[Alicyclobacillus_macrosporangiidus]
FPKM:1.25 TPM:1.16
843 A_BomaMG_comp11221_c0_seq1
1551bp
FPKM:2.52 TPM:2.33
844 A_BomaMG_comp11222_c0_seq1
1418bp
PREDICTED:_uncharacterized_protein_LOC106142086_[Amyelois_transitella]
FPKM:3.03 TPM:2.81
845 A_BomaMG_comp11222_c0_seq2
1476bp
PREDICTED:_uncharacterized_protein_LOC106142086_[Amyelois_transitella]
FPKM:1.57 TPM:1.46
846 A_BomaMG_comp11223_c0_seq1
1387bp
PREDICTED:_folylpolyglutamate_synthase,_mitochondrial-like_isoform_X1_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0004326 F tetrahydrofolylpolyglutamate synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006730 P one-carbon metabolic process
GO:0009058 P biosynthetic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0046901 P tetrahydrofolylpolyglutamate biosynthetic process
FPKM:3.79 TPM:3.51
847 A_BomaMG_comp112249_c0_seq1
495bp
dnaJ_homolog_subfamily_C_member_16_precursor_[Bombyx_mori]
GO:0005623 C obsolete cell
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045454 P cell redox homeostasis
FPKM:4.87 TPM:4.51
848 A_BomaMG_comp11224_c0_seq1
1460bp
PREDICTED:_serine/threonine-protein_kinase_TBK1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002218 P activation of innate immune response
GO:0002376 P immune system process
GO:0003676 F nucleic acid binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0010629 P negative regulation of gene expression
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0032727 P positive regulation of interferon-alpha production
GO:0032728 P positive regulation of interferon-beta production
GO:0042802 F identical protein binding
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0044565 P dendritic cell proliferation
GO:0045087 P innate immune response
GO:0045359 P positive regulation of interferon-beta production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050830 P defense response to Gram-positive bacterium
GO:0051219 F phosphoprotein binding
GO:0051607 P defense response to virus
GO:1904417 P positive regulation of xenophagy
FPKM:4.66 TPM:4.31
849 A_BomaMG_comp11226_c0_seq1
341bp
FPKM:4.87 TPM:4.51
850 A_BomaMG_comp11227_c0_seq1
1032bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_F09G8.5_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0007010 P cytoskeleton organization
GO:0007224 P smoothened signaling pathway
GO:0008360 P regulation of cell shape
GO:0030030 P cell projection organization
GO:0032391 C photoreceptor connecting cilium
GO:0060271 P cilium assembly
FPKM:2.97 TPM:2.75
851 A_BomaMG_comp11227_c0_seq2
755bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_F09G8.5_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0007010 P cytoskeleton organization
GO:0007224 P smoothened signaling pathway
GO:0008360 P regulation of cell shape
GO:0030030 P cell projection organization
GO:0032391 C photoreceptor connecting cilium
GO:0060271 P cilium assembly
FPKM:0.91 TPM:0.84
852 A_BomaMG_comp11228_c0_seq1
1212bp
PREDICTED:_dynactin_subunit_1_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005818 C aster
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007349 P cellularization
GO:0008090 P retrograde axonal transport
GO:0010970 P transport along microtubule
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030286 C dynein complex
GO:0030496 C midbody
GO:0031616 C spindle pole centrosome
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0035371 C microtubule plus-end
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045502 F dynein complex binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0048491 P retrograde synaptic vesicle transport
GO:0048675 P axon extension
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051299 P centrosome separation
GO:0051383 P kinetochore organization
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
GO:1904115 C axon cytoplasm
FPKM:3.87 TPM:3.59
853 A_BomaMG_comp11228_c0_seq2
266bp
PREDICTED:_dynactin_subunit_1_[Bombyx_mori]
FPKM:0.00 TPM:0.00
854 A_BomaMG_comp11228_c0_seq3
276bp
PREDICTED:_dynactin_subunit_1_[Bombyx_mori]
FPKM:2.80 TPM:2.59
855 A_BomaMG_comp11230_c0_seq1
312bp
PREDICTED:_E3_ubiquitin-protein_ligase_TRIP12_isoform_X2_[Bombyx_mori]
FPKM:7.99 TPM:7.40
856 A_BomaMG_comp11231_c0_seq1
419bp
FPKM:5.85 TPM:5.42
857 A_BomaMG_comp11232_c0_seq1
651bp
ribosomal_protein_L7Ae_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
FPKM:5.63 TPM:5.21
858 A_BomaMG_comp11233_c0_seq1
2591bp
Uncharacterized_protein_OBRU01_08225_[Operophtera_brumata]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003674 F molecular_function
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
FPKM:3.86 TPM:3.57
859 A_BomaMG_comp11235_c0_seq1
525bp
FPKM:4.34 TPM:4.02
860 A_BomaMG_comp11237_c0_seq1
5609bp
PREDICTED:_collagen_alpha-1(IV)_chain_[Papilio_xuthus]
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005587 C collagen type IV trimer
GO:0005604 C basement membrane
GO:0007391 P dorsal closure
GO:0035848 P oviduct morphogenesis
GO:0055013 P cardiac muscle cell development
FPKM:2.38 TPM:2.20
861 A_BomaMG_comp11238_c0_seq1
254bp
FPKM:1.76 TPM:1.63
862 A_BomaMG_comp11239_c0_seq1
1848bp
PREDICTED:_inhibitor_of_apoptosis_2_isoform_X1_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005876 C spindle microtubule
GO:0006915 P apoptotic process
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0007423 P sensory organ development
GO:0008270 F zinc ion binding
GO:0009966 P regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0033160 P obsolete positive regulation of protein import into nucleus, translocation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043281 P regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0045087 P innate immune response
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050829 P defense response to Gram-negative bacterium
GO:0061057 P peptidoglycan recognition protein signaling pathway
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0089720 F caspase binding
GO:0090307 P mitotic spindle assembly
GO:1990001 P inhibition of cysteine-type endopeptidase activity involved in apoptotic process
FPKM:3.92 TPM:3.63
863 A_BomaMG_comp11240_c0_seq1
944bp
PREDICTED:_high_affinity_cAMP-specific_and_IBMX-insensitive_3',5'-cyclic_phosphodiesterase_8A-like_[Plutella_xylostella]
FPKM:3.95 TPM:3.66
864 A_BomaMG_comp11240_c0_seq2
322bp
PREDICTED:_high_affinity_cAMP-specific_and_IBMX-insensitive_3',5'-cyclic_phosphodiesterase_8A_[Bombyx_mori]
FPKM:1.68 TPM:1.56
865 A_BomaMG_comp11242_c0_seq1
345bp
FPKM:1.66 TPM:1.54
866 A_BomaMG_comp11243_c0_seq1
3516bp
hypothetical_protein_KGM_20167_[Danaus_plexippus]
GO:0000278 P mitotic cell cycle
GO:0000790 C chromatin
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
FPKM:3.03 TPM:2.81
867 A_BomaMG_comp11244_c0_seq1
1781bp
PREDICTED:_LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
FPKM:4.10 TPM:3.80
868 A_BomaMG_comp112452_c0_seq1
1528bp
PREDICTED:_zinc_finger_matrin-type_protein_CG9776_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0046872 F metal ion binding
FPKM:2.96 TPM:2.75
869 A_BomaMG_comp11245_c0_seq1
1766bp
hypothetical_protein_KGM_21825_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005768 C endosome
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0055037 C recycling endosome
FPKM:4.42 TPM:4.09
870 A_BomaMG_comp11246_c0_seq1
3192bp
Tyrosine-protein_kinase_HTK16_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
FPKM:3.23 TPM:2.99
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