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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
871 A_BomaMG_comp11249_c0_seq1
477bp
FPKM:3.10 TPM:2.87
872 A_BomaMG_comp1124_c0_seq1
370bp
FPKM:1.98 TPM:1.83
873 A_BomaMG_comp112505_c0_seq1
448bp
FPKM:3.82 TPM:3.53
874 A_BomaMG_comp11250_c0_seq1
521bp
FPKM:1.50 TPM:1.39
875 A_BomaMG_comp11251_c0_seq1
875bp
ubiquitin-specific_protease_[Danaus_plexippus]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035871 P protein K11-linked deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
GO:0044313 P protein K6-linked deubiquitination
GO:1901562 P response to paraquat
FPKM:4.05 TPM:3.75
876 A_BomaMG_comp11251_c1_seq1
292bp
PREDICTED:_uncharacterized_protein_LOC106135613,_partial_[Amyelois_transitella]
FPKM:1.51 TPM:1.40
877 A_BomaMG_comp11253_c0_seq1
274bp
type_IV_secretion_protein_Rhs_[Kosakonia_radicincitans]
FPKM:8.56 TPM:7.93
878 A_BomaMG_comp11254_c0_seq1
315bp
FPKM:3.28 TPM:3.03
879 A_BomaMG_comp11255_c0_seq1
2042bp
PREDICTED:_protein_TAPT1_homolog_isoform_X2_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.49 TPM:3.23
880 A_BomaMG_comp11256_c0_seq1
234bp
sugar_transporter_[Fructobacillus_pseudoficulneus]
FPKM:2.89 TPM:2.68
881 A_BomaMG_comp11256_c1_seq1
494bp
FPKM:3.36 TPM:3.11
882 A_BomaMG_comp11257_c0_seq1
574bp
hypothetical_protein_RR48_04004_[Papilio_machaon]
FPKM:4.92 TPM:4.56
883 A_BomaMG_comp11258_c0_seq1
722bp
FPKM:2.88 TPM:2.67
884 A_BomaMG_comp1125_c0_seq1
482bp
TRAF6_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000209 P protein polyubiquitination
GO:0001503 P ossification
GO:0001843 P neural tube closure
GO:0002376 P immune system process
GO:0002726 P positive regulation of T cell cytokine production
GO:0004842 F ubiquitin-protein transferase activity
GO:0005164 F tumor necrosis factor receptor binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006461 P protein-containing complex assembly
GO:0006955 P immune response
GO:0007165 P signal transduction
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0007250 P activation of NF-kappaB-inducing kinase activity
GO:0007254 P JNK cascade
GO:0008270 F zinc ion binding
GO:0009887 P animal organ morphogenesis
GO:0009898 C cytoplasmic side of plasma membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019221 P cytokine-mediated signaling pathway
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0019901 F protein kinase binding
GO:0030316 P osteoclast differentiation
GO:0031435 F mitogen-activated protein kinase kinase kinase binding
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0031625 F ubiquitin protein ligase binding
GO:0031666 P positive regulation of lipopolysaccharide-mediated signaling pathway
GO:0031996 F thioesterase binding
GO:0032147 P activation of protein kinase activity
GO:0032743 P positive regulation of interleukin-2 production
GO:0035631 C CD40 receptor complex
GO:0042088 P T-helper 1 type immune response
GO:0042102 P positive regulation of T cell proliferation
GO:0042475 P odontogenesis of dentin-containing tooth
GO:0042802 F identical protein binding
GO:0042826 F histone deacetylase binding
GO:0042981 P regulation of apoptotic process
GO:0043011 P myeloid dendritic cell differentiation
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043234 C protein-containing complex
GO:0043422 F protein kinase B binding
GO:0043507 P positive regulation of JUN kinase activity
GO:0045084 P positive regulation of interleukin-12 production
GO:0045410 P positive regulation of interleukin-6 production
GO:0045453 P bone resorption
GO:0045672 P positive regulation of osteoclast differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046849 P bone remodeling
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0048468 P cell development
GO:0048471 C perinuclear region of cytoplasm
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0050852 P T cell receptor signaling pathway
GO:0051023 P regulation of immunoglobulin production
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070498 P interleukin-1-mediated signaling pathway
GO:0070534 P protein K63-linked ubiquitination
GO:0070555 P response to interleukin-1
GO:0071222 P cellular response to lipopolysaccharide
GO:2000679 P positive regulation of transcription regulatory region DNA binding
FPKM:1.47 TPM:1.36
885 A_BomaMG_comp11260_c0_seq1
725bp
PREDICTED:_phosphatidylinositol_3,4,5-trisphosphate_3-phosphatase_and_dual-specificity_protein_phosphatase_PTEN_isoform_X2_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000287 F magnesium ion binding
GO:0001525 P angiogenesis
GO:0001933 P negative regulation of protein phosphorylation
GO:0002902 P regulation of B cell apoptotic process
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005161 F platelet-derived growth factor receptor binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0006629 P lipid metabolic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006915 P apoptotic process
GO:0007092 P positive regulation of ubiquitin protein ligase activity
GO:0007270 P neuron-neuron synaptic transmission
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0007568 P aging
GO:0007584 P response to nutrient
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007626 P locomotory behavior
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008283 P cell population proliferation
GO:0008284 P positive regulation of cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0008289 F lipid binding
GO:0009749 P response to glucose
GO:0009898 C cytoplasmic side of plasma membrane
GO:0010033 P response to organic substance
GO:0010035 P response to inorganic substance
GO:0010043 P response to zinc ion
GO:0010975 P regulation of neuron projection development
GO:0010997 F anaphase-promoting complex binding
GO:0014067 P negative regulation of phosphatidylinositol 3-kinase signaling
GO:0014070 P response to organic cyclic compound
GO:0016311 P dephosphorylation
GO:0016314 F phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity
GO:0016324 C apical plasma membrane
GO:0016477 P cell migration
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0021542 P dentate gyrus development
GO:0021955 P central nervous system neuron axonogenesis
GO:0030165 F PDZ domain binding
GO:0030336 P negative regulation of cell migration
GO:0030534 P adult behavior
GO:0031175 P neuron projection development
GO:0031642 P negative regulation of myelination
GO:0031647 P regulation of protein stability
GO:0031658 P obsolete negative regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0032286 P central nervous system myelin maintenance
GO:0032355 P response to estradiol
GO:0032535 P regulation of cellular component size
GO:0033032 P regulation of myeloid cell apoptotic process
GO:0033198 P response to ATP
GO:0033555 P multicellular organismal response to stress
GO:0035176 P social behavior
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0035749 C myelin sheath adaxonal region
GO:0036294 P cellular response to decreased oxygen levels
GO:0042493 P response to xenobiotic stimulus
GO:0042711 P maternal behavior
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043065 P positive regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043197 C dendritic spine
GO:0043220 C Schmidt-Lanterman incisure
GO:0043491 P protein kinase B signaling
GO:0043542 P endothelial cell migration
GO:0043647 P inositol phosphate metabolic process
GO:0045211 C postsynaptic membrane
GO:0045471 P response to ethanol
GO:0045475 P locomotor rhythm
GO:0045792 P negative regulation of cell size
GO:0046621 P negative regulation of organ growth
GO:0046685 P response to arsenic-containing substance
GO:0046855 P inositol phosphate dephosphorylation
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0048008 P platelet-derived growth factor receptor signaling pathway
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0048679 P regulation of axon regeneration
GO:0048738 P cardiac muscle tissue development
GO:0048853 P forebrain morphogenesis
GO:0048854 P brain morphogenesis
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0050765 P negative regulation of phagocytosis
GO:0050771 P negative regulation of axonogenesis
GO:0050821 P protein stabilization
GO:0050852 P T cell receptor signaling pathway
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051717 F inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity
GO:0051726 P regulation of cell cycle
GO:0051800 F phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity
GO:0051895 P negative regulation of focal adhesion assembly
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060024 P rhythmic synaptic transmission
GO:0060070 P canonical Wnt signaling pathway
GO:0060074 P synapse maturation
GO:0060134 P prepulse inhibition
GO:0060179 P male mating behavior
GO:0060291 P long-term synaptic potentiation
GO:0060292 P long-term synaptic depression
GO:0060341 P regulation of cellular localization
GO:0060736 P prostate gland growth
GO:0060997 P dendritic spine morphogenesis
GO:0061002 P negative regulation of dendritic spine morphogenesis
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0071456 P cellular response to hypoxia
GO:0090071 P negative regulation of ribosome biogenesis
GO:0090344 P negative regulation of cell aging
GO:0090394 P negative regulation of excitatory postsynaptic potential
GO:0097105 P presynaptic membrane assembly
GO:0097107 P postsynaptic density assembly
GO:1903984 P positive regulation of TRAIL-activated apoptotic signaling pathway
GO:2000060 P positive regulation of ubiquitin-dependent protein catabolic process
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
GO:2000463 P positive regulation of excitatory postsynaptic potential
GO:2000808 P negative regulation of synaptic vesicle clustering
GO:2001235 P positive regulation of apoptotic signaling pathway
FPKM:4.24 TPM:3.92
886 A_BomaMG_comp11261_c0_seq1
440bp
cuticular_protein_RR-1_motif_44_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
FPKM:4.46 TPM:4.13
887 A_BomaMG_comp11263_c0_seq1
2632bp
PREDICTED:_SPRY_domain-containing_protein_7_[Amyelois_transitella]
FPKM:2.12 TPM:1.96
888 A_BomaMG_comp11265_c0_seq1
966bp
FPKM:2.80 TPM:2.60
889 A_BomaMG_comp11266_c0_seq1
861bp
FPKM:3.39 TPM:3.14
890 A_BomaMG_comp11267_c0_seq1
691bp
cytochrome_c_oxidase_subunit_II,_partial_(mitochondrion)_[Schmidtea_mediterranea]
FPKM:3.06 TPM:2.83
891 A_BomaMG_comp11269_c0_seq1
584bp
PREDICTED:_free_fatty_acid_receptor_4_[Stegastes_partitus]
FPKM:2.61 TPM:2.42
892 A_BomaMG_comp11269_c1_seq1
802bp
FPKM:2.84 TPM:2.63
893 A_BomaMG_comp11270_c0_seq1
597bp
hypothetical_protein_[Bacillus_endophyticus]
FPKM:4.32 TPM:4.00
894 A_BomaMG_comp11271_c0_seq1
1379bp
FPKM:3.42 TPM:3.17
895 A_BomaMG_comp11272_c0_seq1
1012bp
PREDICTED:_cilia-_and_flagella-associated_protein_57-like_[Bombyx_mori]
FPKM:2.61 TPM:2.42
896 A_BomaMG_comp11273_c0_seq1
789bp
PREDICTED:_phosphoribosylformylglycinamidine_synthase_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004642 F phosphoribosylformylglycinamidine synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0009156 P ribonucleoside monophosphate biosynthetic process
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
FPKM:4.46 TPM:4.13
897 A_BomaMG_comp11274_c0_seq1
384bp
PREDICTED:_calponin_homology_domain-containing_protein_DDB_G0272472-like_[Bombyx_mori]
FPKM:4.85 TPM:4.49
898 A_BomaMG_comp11275_c0_seq1
844bp
PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
FPKM:3.68 TPM:3.41
899 A_BomaMG_comp11276_c0_seq1
1066bp
FPKM:3.14 TPM:2.91
900 A_BomaMG_comp11277_c0_seq1
608bp
PREDICTED:_uncharacterized_protein_LOC101740483_[Bombyx_mori]
FPKM:4.69 TPM:4.34
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