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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp11233_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		Uncharacterized_protein_OBRU01_08225_[Operophtera_brumata]
Ontology
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003674 F molecular_function
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
Transcript
Level		FPKM:3.86 TPM:3.57
ORF Entry
Sequence
(Nucleotide)
CTAACGCTAATTTAAAGTGTATCATCTATCATCAGTTTTCAGCCTGTATTGAATATAATT
AAAGCTACTTTGCTTTAAAAATGGATAATACTTTGCAACTACATTCAACACAGTATACTC
CTTTAAGAAATAAGAGAAGCCGACATTTACTACAGAGAGAAGAGACGTTAAATGTTTCGC
CTATTTTGAACGATACTTCTATTTTTAAAAACTTAAATGATTCGAGTTTACGGCATGTAC
TTGATGAATCTTCCATATTGGTGAATCCCAGTAGCACGGGAGATCATTTGAGCGAAGAAT
TCTTCGAGATAATACAAAGCAGTAGACCTAGCAGTGTTTTAGATACATTAGCAAGGTTAG
CTCAGGTATGTTGTGATTCGTTAGAGTTAATCGAGCCATGGAACAGATATAACGTCCACA
ACTACTGGTTGGCAGAGGAAGCCAACACATGGAAACTAATACATTGCCTGTACGCAGATT
CAATCTCAGAACATCCAGAGTCTTTGGAAAATTTAGTTACTGAAGCAACACTATCACAGC
AGAGCTTAGTGAATGCTCTATTTAGAAGTGATTCTGAACTGAGACTGTTGCAGCTTCTGG
TAGACTGGTTGGAAGCAACTGCTGCTTATCAAGAGGAAGCGACAAAAACTTCAGCACCTG
TCATCGGAAATAACATACACTGGGGCAACACTTTACATGAACTGCTGATTGGAAATAGTC
TATTCAACAAAGAAAAAAACAAGTCTCTAGTCACATGTATGGATCCAGATGCACCAAGAA
GACAAAATAAATCTATACACTCTGATGATATGAAAGATGACAGCGATTTATGTAAACGCA
TCTTTACTGAAGTCCGTTGTGGTAAATTTCAAGAAGCAGTCTCATTATGCATAAGTGCTG
GTCAAGCATGGCGAGGAGCAGTACTACAAGGTTGGAAATTATTACATTATTTGCCCAAAG
ATGATCCAACTGATCCATTAGAAATTCAAGGGAATCCTTCAAGAGATCTTTGGAAATGGT
GTGCCCTAGGAATTGCTAATTGTGCATCTGAAAATATCTACTACAGAGCGACAATTGGTA
TTTTGAGTGGCCACCTGCCTAGTGCACTTCTAGCTTGTCAAGGTAGCTGGGAAGACATTC
TATGGGCTCATTTGAAAATACAAATAGAAGTTAGAGTTGACAAGTTTCTCCATGAACATC
ATTTAACTGTTGATGCTAACACTACACCTTCAGATGTGCTGGAACTATTACAAGCTGAAT
TTCAAACAGATGAAATATCTTTACAGCAAGTATTTAGTGCAGTAAAATCTCTGATGGACG
GAAAACGTGAATCGAACTATCAGTTGTGTCAGCGTTATTTAATGCTTGGTCAAGTAAGAA
CAATAATGTTAAATTCATTAGAATGGCTAGAAAATGCTAATGAGAGGTTTATTCGATTTT
TAGCACATCTCATATTAGTATTGAGACAAATGGGTAAAGATCCTCAGCATGATGTTGGTG
ACCAAGTCTTGGAAAAGTATGTGACATTACTTACCAATAGATTGGTTGATGGATCTGTGG
AGTCCCCAGAGCTTATAGCATATTACACTTCTACAGTTCCAGCCGAAAAACAAATCATTC
TGTATGCAAACTTTATGGACCAAATTCACAAAAGTGATTATAGGCAAGGTGTTGTAAAAG
CTGGGTTGGATGCTGGAATCGATGTTGGTGCATCAGCTCGCGTGGCTATTAAGAAAGCTA
TTGCAGATATACAACAAGGATATGGAAATGTAGAATTGAACTTCACACAGACAAGTGTTA
TAGAAAAGGATAAAACATTGATATCCAAAGTTATTTCTTCTTTAGAATGGTTGGCTTTAG
TTGACAATCAGCTTGAAGAAGCACTATGGTTGAATAATGCAATGATCAGAACATTTATAT
TCATTGGAAACACTGATGCTGCCAATGCATGTCTGACTAGCTTCAACAAAATGTTTTCTA
ACTTTATAAACACAGTTGATTCAAGTACCTCTGAACTAAGAGAACATTTGTGTTTAAAAG
CATACTTGGATGCTCTCGAGGGATTCGCAACTTGGTATAGACATTTTATAAGTGGACAAC
CTAAAGATGTGCAGCCATTACCACCAGATGCAACATTTTCTGATAAAGTATATCATGAAC
AGCAATGTGCACAAGTTGAAAAGAAGAAAGCAATATGGATTAATGCAGTTTCACATCAAT
CAAGACATACCAAAAGCTTACTATACAATGTTTTACTGTTTCCAGGAGGTTGGTTGCAAG
ATGAGAGTGATAGTACATCATCAGACAATTTCAACCAGGAAGAGAAAACAGAAAGATTAA
AACAGTTGGACACCCTTAGACGACTTTGTGTGCCAGAAATTGTGATTTTATTACTAAAGA
TTTTACAGAGTAATGAGGATATTGAGAGTCACAAGGAAGCCATTAAATTGGGCAACTTAA
TTGCTGCAGAAAATAGAGCTCTATATCAAGTGTTCAACAGAAGTAAGCTGATGGAGATTT
TGGAGAGGATCAAGGAGTCATCTCTGTTCCTTATGGAAAAAGGAACAGACATTTTAGGTT
TTGAAATAAGG
(2591 bp)

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