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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1921 A_BomaMG_comp12081_c0_seq2
797bp
olfactory_receptor_[Bombyx_mori]
FPKM:0.88 TPM:0.81
1922 A_BomaMG_comp12082_c0_seq1
2649bp
PREDICTED:_farnesyl_diphosphate_synthase_3_isoform_X1_[Bombyx_mori]
GO:0004161 F dimethylallyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006695 P cholesterol biosynthetic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016126 P sterol biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
FPKM:2.78 TPM:2.58
1923 A_BomaMG_comp12083_c0_seq1
1075bp
hypothetical_protein_KGM_08378_[Danaus_plexippus]
GO:0003735 F structural constituent of ribosome
GO:0005347 F ATP transmembrane transporter activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0015217 F ADP transmembrane transporter activity
GO:0015228 F coenzyme A transmembrane transporter activity
GO:0015866 P ADP transport
GO:0015867 P ATP transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035349 P coenzyme A transmembrane transport
GO:0043262 F adenosine-diphosphatase activity
GO:0055085 P transmembrane transport
GO:0080121 P AMP transport
GO:0080122 F AMP transmembrane transporter activity
FPKM:23.47 TPM:21.73
1924 A_BomaMG_comp12084_c0_seq1
504bp
PREDICTED:_myosin-IA-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0042623 F ATP hydrolysis activity
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
FPKM:22.39 TPM:20.73
1925 A_BomaMG_comp12084_c1_seq1
307bp
hypothetical_protein_EPUS_05908_[Endocarpon_pusillum_Z07020]
FPKM:1.34 TPM:1.24
1926 A_BomaMG_comp120850_c0_seq1
500bp
PREDICTED:_uncharacterized_protein_LOC101740483_[Bombyx_mori]
FPKM:3.30 TPM:3.06
1927 A_BomaMG_comp12085_c0_seq1
1928bp
chaperonin_subunit_6a_zeta_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001669 C acrosomal vesicle
GO:0002199 C zona pellucida receptor complex
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005832 C chaperonin-containing T-complex
GO:0005874 C microtubule
GO:0006457 P protein folding
GO:0007339 P binding of sperm to zona pellucida
GO:0032212 P positive regulation of telomere maintenance via telomerase
GO:0044183 F protein folding chaperone
GO:0044297 C cell body
GO:0044822 F RNA binding
GO:0050821 P protein stabilization
GO:0051082 F unfolded protein binding
GO:0070062 C extracellular exosome
GO:0071987 F WD40-repeat domain binding
GO:1901998 P toxin transport
GO:1904851 P positive regulation of establishment of protein localization to telomere
GO:1904871 P positive regulation of protein localization to Cajal body
GO:1904874 P positive regulation of telomerase RNA localization to Cajal body
FPKM:24.11 TPM:22.33
1928 A_BomaMG_comp12087_c0_seq1
1004bp
PREDICTED:_ER_membrane_protein_complex_subunit_3_[Amyelois_transitella]
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030140 C trans-Golgi network transport vesicle
GO:0034975 P protein folding in endoplasmic reticulum
GO:0045494 P photoreceptor cell maintenance
GO:0060041 P retina development in camera-type eye
GO:0072546 C EMC complex
FPKM:21.81 TPM:20.19
1929 A_BomaMG_comp12088_c0_seq1
1412bp
PREDICTED:_mitochondrial_inner_membrane_protein_OXA1L_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005746 C mitochondrial respirasome
GO:0006461 P protein-containing complex assembly
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0032592 C integral component of mitochondrial membrane
GO:0032780 P negative regulation of ATP-dependent activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0033615 P mitochondrial proton-transporting ATP synthase complex assembly
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0051205 P protein insertion into membrane
GO:0051262 P protein tetramerization
GO:0051354 P negative regulation of oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0097031 P obsolete mitochondrial respiratory chain complex I biogenesis
GO:0097177 F mitochondrial ribosome binding
FPKM:23.32 TPM:21.59
1930 A_BomaMG_comp12089_c0_seq1
898bp
PREDICTED:_28S_ribosomal_protein_S18a,_mitochondrial_[Papilio_xuthus]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
FPKM:18.87 TPM:17.47
1931 A_BomaMG_comp1208_c0_seq1
290bp
FPKM:1.84 TPM:1.71
1932 A_BomaMG_comp12090_c0_seq1
1110bp
PREDICTED:_uncharacterized_protein_LOC101742726_isoform_X1_[Bombyx_mori]
FPKM:2.67 TPM:2.47
1933 A_BomaMG_comp12090_c0_seq2
1125bp
PREDICTED:_uncharacterized_protein_LOC101742726_isoform_X1_[Bombyx_mori]
FPKM:19.94 TPM:18.46
1934 A_BomaMG_comp120947_c0_seq1
394bp
FPKM:1.60 TPM:1.48
1935 A_BomaMG_comp12094_c0_seq1
481bp
FPKM:1.81 TPM:1.68
1936 A_BomaMG_comp120965_c0_seq1
1579bp
PREDICTED:_peptidylglycine_alpha-hydroxylating_monooxygenase_isoform_X1_[Amyelois_transitella]
GO:0001519 P peptide amidation
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0004504 F peptidylglycine monooxygenase activity
GO:0005507 F copper ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006518 P peptide metabolic process
GO:0007613 P memory
GO:0009620 P response to fungus
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016715 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen
GO:0032504 P multicellular organism reproduction
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.08 TPM:1.93
1937 A_BomaMG_comp12096_c0_seq1
949bp
PREDICTED:_saccharopine_dehydrogenase-like_oxidoreductase_[Bombyx_mori]
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:12.79 TPM:11.84
1938 A_BomaMG_comp12097_c0_seq1
1880bp
PREDICTED:_GPI_transamidase_component_PIG-T_[Plutella_xylostella]
GO:0003923 F GPI-anchor transamidase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016255 P attachment of GPI anchor to protein
GO:0030182 P neuron differentiation
GO:0042765 C GPI-anchor transamidase complex
GO:0051402 P neuron apoptotic process
FPKM:20.85 TPM:19.31
1939 A_BomaMG_comp120989_c0_seq1
236bp
FPKM:0.56 TPM:0.52
1940 A_BomaMG_comp12099_c0_seq1
815bp
translocase_of_inner_mitochondrial_membrane_8_homolog_b_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0015031 P protein transport
GO:0015450 F protein-transporting ATPase activity
GO:0016020 C membrane
GO:0046872 F metal ion binding
GO:0071806 P protein transmembrane transport
FPKM:19.51 TPM:18.06
1941 A_BomaMG_comp120_c0_seq1
228bp
PREDICTED:_erythroid_differentiation-related_factor_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
FPKM:1.90 TPM:1.76
1942 A_BomaMG_comp121005_c0_seq1
388bp
FPKM:3.12 TPM:2.89
1943 A_BomaMG_comp12100_c0_seq1
1184bp
PREDICTED:_coiled-coil_domain-containing_protein_28B_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0030030 P cell projection organization
GO:0042384 P cilium assembly
FPKM:16.70 TPM:15.46
1944 A_BomaMG_comp12101_c0_seq1
309bp
FPKM:5.01 TPM:4.64
1945 A_BomaMG_comp12102_c0_seq1
659bp
glutathione_S-transferae_zeta_2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004364 F glutathione transferase activity
GO:0005737 C cytoplasm
GO:0006559 P L-phenylalanine catabolic process
GO:0006572 P tyrosine catabolic process
GO:0006749 P glutathione metabolic process
GO:0009072 P aromatic amino acid family metabolic process
GO:0016034 F maleylacetoacetate isomerase activity
GO:0016740 F transferase activity
GO:0016853 F isomerase activity
FPKM:0.85 TPM:0.78
1946 A_BomaMG_comp12102_c0_seq2
950bp
glutathione_S-transferae_zeta_2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004364 F glutathione transferase activity
GO:0005737 C cytoplasm
GO:0006559 P L-phenylalanine catabolic process
GO:0006572 P tyrosine catabolic process
GO:0006749 P glutathione metabolic process
GO:0009072 P aromatic amino acid family metabolic process
GO:0016034 F maleylacetoacetate isomerase activity
GO:0016740 F transferase activity
GO:0016853 F isomerase activity
FPKM:24.05 TPM:22.27
1947 A_BomaMG_comp12104_c0_seq1
2372bp
PREDICTED:_venom_serine_carboxypeptidase-like_[Amyelois_transitella]
GO:0004180 F carboxypeptidase activity
GO:0004185 F serine-type carboxypeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
FPKM:16.85 TPM:15.60
1948 A_BomaMG_comp12105_c0_seq1
1989bp
PREDICTED:_acyl-CoA_dehydrogenase_family_member_9,_mitochondrial_[Amyelois_transitella]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0030425 C dendrite
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
FPKM:20.38 TPM:18.87
1949 A_BomaMG_comp12106_c0_seq1
692bp
small_nuclear_ribonucleoprotein_protein_F_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005685 C U1 snRNP
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0006397 P mRNA processing
GO:0007052 P mitotic spindle organization
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:17.58 TPM:16.28
1950 A_BomaMG_comp121077_c0_seq1
231bp
endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:2.42 TPM:2.24
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