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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1891 A_BomaMG_comp12047_c0_seq1
3094bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_35_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006624 P vacuolar protein processing
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030904 C retromer complex
GO:0031647 P regulation of protein stability
GO:0042147 P retrograde transport, endosome to Golgi
GO:0045056 P transcytosis
GO:0061357 P positive regulation of Wnt protein secretion
GO:0070062 C extracellular exosome
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:0097422 C tubular endosome
GO:0097481 C postsynaptic density
GO:1902823 P negative regulation of late endosome to lysosome transport
GO:1990126 P endocytic recycling
FPKM:4.96 TPM:4.59
1892 A_BomaMG_comp12047_c0_seq2
3004bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_35_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006624 P vacuolar protein processing
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030904 C retromer complex
GO:0031647 P regulation of protein stability
GO:0042147 P retrograde transport, endosome to Golgi
GO:0045056 P transcytosis
GO:0061357 P positive regulation of Wnt protein secretion
GO:0070062 C extracellular exosome
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:0097422 C tubular endosome
GO:0097481 C postsynaptic density
GO:1902823 P negative regulation of late endosome to lysosome transport
GO:1990126 P endocytic recycling
FPKM:9.30 TPM:8.61
1893 A_BomaMG_comp12048_c0_seq1
235bp
FPKM:6.26 TPM:5.80
1894 A_BomaMG_comp12051_c0_seq1
206bp
Glutathione-regulated_potassium-efflux_system_protein_kefC_[Curvibacter_putative_symbiont_of_Hydra_magnipapillata]
FPKM:0.00 TPM:0.00
1895 A_BomaMG_comp120526_c0_seq1
490bp
PREDICTED:_uncharacterized_protein_C18orf8_[Bombyx_mori]
GO:0005765 C lysosomal membrane
FPKM:3.41 TPM:3.15
1896 A_BomaMG_comp12052_c0_seq1
876bp
putative_eukaryotic_translation_initiation_factor_4_gamma,_2_[Danaus_plexippus]
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0016020 C membrane
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0044822 F RNA binding
FPKM:12.97 TPM:12.01
1897 A_BomaMG_comp12053_c0_seq1
1127bp
PREDICTED:_uncharacterized_protein_C16orf52_homolog_A_[Papilio_polytes]
FPKM:13.14 TPM:12.16
1898 A_BomaMG_comp12055_c0_seq1
1136bp
PREDICTED:_zinc_transporter_2-like_[Bombyx_mori]
GO:0005385 F zinc ion transmembrane transporter activity
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006829 P zinc ion transport
GO:0008324 F cation transmembrane transporter activity
GO:0010008 C endosome membrane
GO:0010043 P response to zinc ion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0055085 P transmembrane transport
GO:0061088 P regulation of sequestering of zinc ion
GO:0071577 P zinc ion transmembrane transport
GO:0098655 P cation transmembrane transport
FPKM:18.51 TPM:17.14
1899 A_BomaMG_comp12057_c0_seq1
587bp
PREDICTED:_spectrin_beta_chain,_non-erythrocytic_5_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005916 C fascia adherens
GO:0005938 C cell cortex
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030018 C Z disc
GO:0030507 F spectrin binding
GO:0030863 C cortical cytoskeleton
GO:0032437 C cuticular plate
GO:0033270 C paranode region of axon
GO:0043209 C myelin sheath
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0051693 P actin filament capping
GO:0070062 C extracellular exosome
GO:1903561 C extracellular vesicle
FPKM:24.23 TPM:22.44
1900 A_BomaMG_comp12058_c0_seq1
1020bp
bolA-like_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0008150 P biological_process
FPKM:17.44 TPM:16.15
1901 A_BomaMG_comp12059_c0_seq1
810bp
juvenile_hormone_binding_protein_an-0128_precursor_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0007610 P behavior
GO:0007617 P mating behavior
GO:0007622 P rhythmic behavior
GO:0007623 P circadian rhythm
GO:0007631 P feeding behavior
GO:0008049 P male courtship behavior
GO:0008343 P adult feeding behavior
GO:0032504 P multicellular organism reproduction
GO:0042594 P response to starvation
GO:0042595 P behavioral response to starvation
GO:0048511 P rhythmic process
FPKM:17.78 TPM:16.46
1902 A_BomaMG_comp120606_c0_seq1
646bp
FPKM:2.84 TPM:2.63
1903 A_BomaMG_comp120611_c0_seq1
459bp
reverse_transcriptase_[Bombyx_mori]
FPKM:1.47 TPM:1.36
1904 A_BomaMG_comp12064_c0_seq1
1137bp
PREDICTED:_solute_carrier_family_35_member_F5_isoform_X1_[Bombyx_mori]
FPKM:11.51 TPM:10.66
1905 A_BomaMG_comp12067_c0_seq1
2843bp
PREDICTED:_uncharacterized_protein_LOC106711418_[Papilio_machaon]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0030054 C cell junction
GO:0042127 P regulation of cell population proliferation
GO:0043234 C protein-containing complex
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
FPKM:12.62 TPM:11.68
1906 A_BomaMG_comp12068_c0_seq1
351bp
PREDICTED:_uncharacterized_protein_LOC105842669_[Bombyx_mori]
FPKM:21.56 TPM:19.96
1907 A_BomaMG_comp120692_c0_seq1
219bp
PREDICTED:_shootin-1-like_isoform_X2_[Bombyx_mori]
FPKM:4.42 TPM:4.09
1908 A_BomaMG_comp12069_c0_seq1
1027bp
PREDICTED:_immediate_early_response_3-interacting_protein_1-like_[Plutella_xylostella]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:8.37 TPM:7.75
1909 A_BomaMG_comp1206_c0_seq1
258bp
glutamine_synthetase_[Halocynthiibacter_arcticus]
FPKM:0.85 TPM:0.78
1910 A_BomaMG_comp120700_c0_seq1
293bp
hypothetical_protein_[Laribacter_hongkongensis]
FPKM:5.09 TPM:4.72
1911 A_BomaMG_comp12070_c0_seq1
551bp
FPKM:7.34 TPM:6.79
1912 A_BomaMG_comp12072_c0_seq1
557bp
FPKM:25.45 TPM:23.57
1913 A_BomaMG_comp12073_c0_seq1
1330bp
PREDICTED:_speckle-type_POZ_protein-like_[Plutella_xylostella]
GO:0016567 P protein ubiquitination
FPKM:21.48 TPM:19.89
1914 A_BomaMG_comp120750_c0_seq1
418bp
hypothetical_protein_[Gimesia_maris]
FPKM:4.43 TPM:4.10
1915 A_BomaMG_comp12075_c0_seq1
923bp
F-actin_capping_protein_beta_subunit_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0007010 P cytoskeleton organization
GO:0008150 P biological_process
GO:0008290 C F-actin capping protein complex
GO:0010591 P regulation of lamellipodium assembly
GO:0022604 P regulation of cell morphogenesis
GO:0030017 C sarcomere
GO:0030036 P actin cytoskeleton organization
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0051015 F actin filament binding
GO:0051016 P barbed-end actin filament capping
GO:0051490 P negative regulation of filopodium assembly
GO:0051693 P actin filament capping
GO:0071203 C WASH complex
FPKM:22.37 TPM:20.71
1916 A_BomaMG_comp12077_c0_seq1
203bp
FPKM:2.02 TPM:1.87
1917 A_BomaMG_comp12078_c0_seq1
257bp
Putative_uncharacterized_transposon-derived_protein_F52C9.6,_partial_[Toxocara_canis]
FPKM:9.84 TPM:9.11
1918 A_BomaMG_comp12079_c0_seq1
1512bp
stromal_cell-derived_factor_2_precursor_[Bombyx_mori]
GO:0000032 P cell wall mannoprotein biosynthetic process
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0031502 C dolichyl-phosphate-mannose-protein mannosyltransferase complex
GO:0035269 P protein O-linked mannosylation
GO:0044845 P chain elongation of O-linked mannose residue
GO:1900101 P regulation of endoplasmic reticulum unfolded protein response
FPKM:14.46 TPM:13.39
1919 A_BomaMG_comp12080_c0_seq1
509bp
general_control_of_amino_acid_synthesis-like_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0007274 P neuromuscular synaptic transmission
GO:0008057 P eye pigment granule organization
GO:0008355 P olfactory learning
GO:0016197 P endosomal transport
GO:0031083 C BLOC-1 complex
GO:0048489 P synaptic vesicle transport
GO:0050808 P synapse organization
FPKM:26.40 TPM:24.44
1920 A_BomaMG_comp12081_c0_seq1
206bp
olfactory_receptor_[Bombyx_mori]
FPKM:0.07 TPM:0.07
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