SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12106_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		small_nuclear_ribonucleoprotein_protein_F_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005685 C U1 snRNP
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0006397 P mRNA processing
GO:0007052 P mitotic spindle organization
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:17.58 TPM:16.28
ORF Entry
Sequence
(Nucleotide)
GTCCCTTAAAAAAAAAAGAGTAGAAATTAGCAAATTAGCGTTGAGCGTCGAACTCGAACT
TCGAAGCGAAGCCGATAAGTTTTGAGGTTATATTTTGTATTTCTTGTTAGCCGAGACTAA
AAATCTGCAAAAATGGCGGCTGCTATGCCAATAAACCCCAAACCATTTCTTAATAGTCTA
ACGGGTAAATCCGTGCTAGTTAAATTAAAATGGGGTCATGAATACAAAGGATTGTTAGTA
TCAACAGATGGCTACATGAATTTGCAACTTGCTAATACTGAAGAACTTGTCGATGGAACT
TGTACAGGTAATTTAGGTGAAGTTTTAATAAGATGCAATAATGTCTTGTATGTAAGAGGA
GCTGATGAAGAAGATGAAGAAGGAGAAATGAAAGAATAATTAGTAATTATTACATAAGTT
AGAATAAGGAATTATCTTAAGAATAACAGGCAAAAGGGAAATTTTAAGCAAAAAAATAGA
AATTTCATATTACTCTGTTAGCAGTAAAATTACCTTAGGTATATATCCCGAAATACTAAT
GATTGAGGAGAAAAATGTTAATTGGAACTATTGTTTTATACAATGTTTAAATGAAACAAC
TTTAATACTTTTTTTTTATAATAACTATGTCTGAAACAACCTCTTCAGCATGAATTCCAT
AATTTGTATAATTAATTATAAGTAAATTTTCA
(692 bp)

- SilkBase 1999-2023 -