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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12082_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_farnesyl_diphosphate_synthase_3_isoform_X1_[Bombyx_mori]
Ontology
GO:0004161 F dimethylallyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006695 P cholesterol biosynthetic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016126 P sterol biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.78 TPM:2.58
ORF Entry
Sequence
(Nucleotide)
GGCAGCGGCTTGGCTCTGCCCCTAGCATTGCTGGCGTCCATGAGCGACGGTAACCACTCA
CCATCATTATAGCCGTATGATCGCTTGCCTACAAGGGTAATAAAAAACTCGTATAAGCTC
TTTCGTTTATTCCTGAGTAATACATGGTTCAAGCGATCACTCTATTGCAACAGAGCAGTC
ATTTTGAAATAGTATGAACGCAAGACCCGATACGTCGTACACTACGAAAGATGAAGGATA
GTGAATAGTGTACTTATATGTTCGTTCATTCATTCGTTCACTCGTTCATTCACTGATTGA
CTTACGAGGCACGGCGTATCTAAAACTGCACACGTAAAAAGGCTTAACTGTTTTATTGTT
CATTTTAAATGCGATTAGAATTAGATATCGTGATGAATTAACTTTAATTACTTTTATTTG
ACCGGTTTTTATTTTATATTACGTACATATTAAAATCGTAAGACTAAATTTAACAATTGT
CTTATAAAATAGAATGCGCAAATTTGAGACGAGTAATAATAATACTTGTAGTTTTTTCAA
TATGTATGTACGCCAATTAAAATTCCCTCAGGTTTATTGAGTTTTTTTTAAACCACATTT
TATTATTGTATTTCCGAGAAACAGACTTCCGATGCGTGTCGTTGAATTCACATATTGTTA
AAAAGGTGGAATATATAACTATTTATAGGTCAAAAAAATATTTATGTGTTTGTATAAATA
AGAACAACCGATTTCAAATTTTTGAGATGTTTCCAATAAACGCGCAAACTCCGAATACTT
TAAGAGTGTTTTCAGCCTTCTAAACGTTATGAGGTTCAATTAGTAAAATTATTTAAAATT
ACTCTGACAGAATGTCAATTATGTATCAAGATTAGATTTTTTATACAATCTACAAGCACG
GAGTTTTTTTGAATGCTGAATGAAAGTTCTGCGTGGGATCTTTATTCATTGGTTAAATTT
CATACTACAGTGAAGATTTATATCAATATAACAACAAAGTTATTTTTTTAGTTTAAATGC
AACAACTGTAAAATGTTATTCGTATTTTATAAAGGTTTTTCGGATGGTTGTTTTTTAAAT
TACACAGAAATTAAATAGACCCATAGCTGCCATGCCATGAAAGTACAGCGTGTTGTTTTT
CCCATTATGTCTGGCTCGCTTAATTTCTGAAATAAGCGCATTTTCATACATCCCTGAACA
AAGGAACATATTATTCTTTTTTATCGGAAATTTTATATCTTTTCACATTTTCAGTGTTTT
TTTTTATCCCCGTCTATTTCCTCCTACTCTACTACATATTGGAATCACTAACTGTTAAGA
ATTTTAATAAATAGTTGAACATTCATACTCAACAATATTATGACTAGCCTCGTCCCGGAA
CACGCGAGCACGAATTAATAACTTCTCTTGAATATCATATCGAGGAGTTTAAAGAAAATC
GCAGGCGACGTACTAGAGGGTAGCGCGTTAATCTTCTTTAAGATGCCGCTGTGTATTTCG
TCCTCTTGTTCTTTGTATAGCTTTGGCAACTGCAAGTCTTCGTAAAGTCGCTTTATCGAC
GCGACGTCGTCCGGGTCTTTGCTCGCGTAGTTCTGTGCGAACAGCGTTCGTTGCGCGTCG
TTACACCGTTGCAGTGCATTAACCGCCAGCCAAGAGCACTTGCCTTCTTGGATGTCGGTC
CCTTTTTTCCCTGTAACTGATTCGTTGCCGAAGCAGTCCATGAAGTCGTCCTGAATTTGA
AACAGCTTGCCTATCTCAAAACATATTCCTTCAATGTCTTCGATAGGCGCATTCTGCCCG
TTCTGGGTCAAGATCAAGCCGAGAAAAACCGGCAACTTGATTGAGTAATACGAGGTCTTG
TATTTAACGATGGAATAGTATCGCTCCGTCGTGAACAGACTGTAGTCTTGTTTGTTGCGG
TGCGCCATGGCGTAATCTAAATGCTGTCCCATGCTCGTATAGAGAAGAGCCTCGTTGAAA
ATGTCCAGGATGTCTGCGTATTCTTTAGCTTTCCCGAAATATATCTTGAGTATTTCGTAT
ATAGAACCGTAGACGAGTATGGCGTCGTTGATGGCGCCGAGGCCCACGTCGGGCATGCGG
TACCAGCACGGGACTCCGCGCCGGGTCGACGACCCGTCCATTATATCGTCGTTCATTATC
AAGTACGCCTGCAGCATTTCCGTACACCAACCGGCGACACGTGCTAACCTCACAATCTCT
TCGGTAACGTTTTCCGGTTTCTCGAATAATTCATAAGCGAGCACCGTTGTTATGCCCCTG
ATTTTCTTACCACCTTTGACATTGTATTCTAAAACCTTTTTAACCCAGCTTCCGAGTTCT
GGTAGCTGTGTGAATTTCTTATTTGTCGTTAGATTGTCGATAATACCTTTCCAGGCATCT
TGGAATGTTTCCCTTTCTTTTGCTATTTGCGAAACACTAGCTGCATATGCTGAACTACAC
CTGCATCCAGCTGATTGAAAACTTATGCTGTTTATTGGATATATTTTTCTTGTTCTGTTA
ATTAATCGTAGAAACATCGATGTGGTGTTCATGTTGAGACTTCTTCACTTTCACTGACCG
AATTCCACATCCAATAAAGTGAGAATTTCTCCGAAACAATTTTTTTTCGAGTTTGATTCT
ATACTTTTT
(2649 bp)

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