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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1861 A_BomaMG_comp12013_c0_seq1
2068bp
PREDICTED:_E3_ubiquitin-protein_ligase_TRIP12_isoform_X4_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009790 P embryo development
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046966 F thyroid hormone receptor binding
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
FPKM:16.91 TPM:15.66
1862 A_BomaMG_comp12014_c0_seq1
4974bp
calcineurin_B_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005955 C calcineurin complex
GO:0006470 P protein dephosphorylation
GO:0007126 P meiotic cell cycle
GO:0007269 P neurotransmitter secretion
GO:0008021 C synaptic vesicle
GO:0008597 F calcium-dependent protein serine/threonine phosphatase regulator activity
GO:0016192 P vesicle-mediated transport
GO:0030241 P skeletal muscle myosin thick filament assembly
GO:0030431 P sleep
GO:0045214 P sarcomere organization
GO:0046872 F metal ion binding
GO:0050790 P regulation of catalytic activity
FPKM:13.19 TPM:12.21
1863 A_BomaMG_comp12015_c0_seq1
393bp
FPKM:10.41 TPM:9.64
1864 A_BomaMG_comp12018_c0_seq1
734bp
PREDICTED:_mitochondrial_2-oxoglutarate/malate_carrier_protein-like_[Amyelois_transitella]
GO:0003735 F structural constituent of ribosome
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005887 C integral component of plasma membrane
GO:0006006 P glucose metabolic process
GO:0006094 P gluconeogenesis
GO:0006412 P translation
GO:0006810 P transport
GO:0015367 F oxoglutarate:malate antiporter activity
GO:0015742 P alpha-ketoglutarate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0044822 F RNA binding
FPKM:20.35 TPM:18.84
1865 A_BomaMG_comp120198_c0_seq1
653bp
FPKM:2.08 TPM:1.93
1866 A_BomaMG_comp12019_c0_seq1
2316bp
PREDICTED:_m7GpppX_diphosphatase_[Papilio_polytes]
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000340 F RNA 7-methylguanosine cap binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0036245 P cellular response to menadione
GO:0043069 P negative regulation of programmed cell death
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0050072 F m7G(5')pppN diphosphatase activity
FPKM:17.84 TPM:16.52
1867 A_BomaMG_comp12021_c0_seq1
743bp
PREDICTED:_nesprin-1-like_isoform_X3_[Bombyx_mori]
FPKM:16.95 TPM:15.69
1868 A_BomaMG_comp120227_c0_seq1
473bp
FPKM:3.14 TPM:2.91
1869 A_BomaMG_comp12022_c0_seq1
1763bp
PREDICTED:_uncharacterized_protein_LOC106102178_[Papilio_polytes]
FPKM:14.48 TPM:13.41
1870 A_BomaMG_comp120238_c0_seq1
409bp
FPKM:2.53 TPM:2.35
1871 A_BomaMG_comp12024_c0_seq1
454bp
hypothetical_protein_RR48_13832_[Papilio_machaon]
FPKM:19.53 TPM:18.09
1872 A_BomaMG_comp12026_c0_seq1
1032bp
surfeit_1_isoform_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004129 F cytochrome-c oxidase activity
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006119 P oxidative phosphorylation
GO:0006754 P ATP biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1902600 P proton transmembrane transport
FPKM:18.98 TPM:17.58
1873 A_BomaMG_comp12028_c0_seq1
1048bp
PREDICTED:_protein_FAM151A_isoform_X2_[Papilio_xuthus]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:8.93 TPM:8.27
1874 A_BomaMG_comp12028_c0_seq2
1105bp
PREDICTED:_protein_FAM151A_isoform_X2_[Papilio_xuthus]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:9.91 TPM:9.18
1875 A_BomaMG_comp120304_c0_seq1
1442bp
Uncharacterized_protein_OBRU01_24682_[Operophtera_brumata]
FPKM:1.88 TPM:1.74
1876 A_BomaMG_comp12031_c0_seq1
1636bp
PREDICTED:_ATP-dependent_Clp_protease_ATP-binding_subunit_clpX-like,_mitochondrial_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006457 P protein folding
GO:0009368 C endopeptidase Clp complex
GO:0042645 C mitochondrial nucleoid
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
GO:0051603 P proteolysis involved in cellular protein catabolic process
FPKM:16.37 TPM:15.16
1877 A_BomaMG_comp12032_c0_seq1
1085bp
hypothetical_protein_KGM_09534_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0007030 P Golgi organization
GO:0031965 C nuclear membrane
FPKM:15.51 TPM:14.36
1878 A_BomaMG_comp12033_c0_seq1
394bp
FPKM:4.79 TPM:4.43
1879 A_BomaMG_comp12033_c1_seq1
277bp
deoxyribodipyrimidine_photolyase_family_protein_[Hyphomonas_polymorpha_PS728]
FPKM:1.04 TPM:0.96
1880 A_BomaMG_comp12037_c0_seq1
1889bp
PREDICTED:_mitochondrial_import_inner_membrane_translocase_subunit_Tim17-B_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0015266 F protein transmembrane transporter activity
GO:0015450 F protein-transporting ATPase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030150 P protein import into mitochondrial matrix
GO:0031305 C integral component of mitochondrial inner membrane
FPKM:14.23 TPM:13.17
1881 A_BomaMG_comp12038_c0_seq1
2474bp
PREDICTED:_uncharacterized_protein_LOC101741587_[Bombyx_mori]
FPKM:18.77 TPM:17.38
1882 A_BomaMG_comp12039_c0_seq1
672bp
FPKM:8.70 TPM:8.06
1883 A_BomaMG_comp1203_c0_seq1
238bp
FPKM:0.55 TPM:0.51
1884 A_BomaMG_comp1203_c1_seq1
343bp
FPKM:1.26 TPM:1.16
1885 A_BomaMG_comp120405_c0_seq1
217bp
FPKM:0.76 TPM:0.71
1886 A_BomaMG_comp12040_c0_seq1
1128bp
PREDICTED:_39S_ribosomal_protein_L44,_mitochondrial-like_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0006396 P RNA processing
GO:0016787 F hydrolase activity
GO:0030422 P production of siRNA involved in RNA interference
GO:0030529 C ribonucleoprotein complex
GO:0031053 P primary miRNA processing
GO:0031054 P pre-miRNA processing
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:18.24 TPM:16.89
1887 A_BomaMG_comp12041_c0_seq1
1846bp
tyrosine-protein_kinase_Src42A-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0006099 P tricarboxylic acid cycle
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007395 P dorsal closure, spreading of leading edge cells
GO:0007411 P axon guidance
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019233 P sensory perception of pain
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0034332 P adherens junction organization
GO:0036335 P intestinal stem cell homeostasis
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042127 P regulation of cell population proliferation
GO:0042742 P defense response to bacterium
GO:0043277 P apoptotic cell clearance
GO:0045087 P innate immune response
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046529 P imaginal disc fusion, thorax closure
GO:0048749 P compound eye development
GO:0051017 P actin filament bundle assembly
GO:0090136 P epithelial cell-cell adhesion
FPKM:11.26 TPM:10.43
1888 A_BomaMG_comp12041_c0_seq2
1514bp
PREDICTED:_tyrosine-protein_kinase_Src42A-like_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0006099 P tricarboxylic acid cycle
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007395 P dorsal closure, spreading of leading edge cells
GO:0007411 P axon guidance
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019233 P sensory perception of pain
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0034332 P adherens junction organization
GO:0036335 P intestinal stem cell homeostasis
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042127 P regulation of cell population proliferation
GO:0042742 P defense response to bacterium
GO:0043277 P apoptotic cell clearance
GO:0045087 P innate immune response
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046529 P imaginal disc fusion, thorax closure
GO:0048749 P compound eye development
GO:0051017 P actin filament bundle assembly
GO:0090136 P epithelial cell-cell adhesion
FPKM:1.54 TPM:1.43
1889 A_BomaMG_comp12043_c0_seq1
1296bp
hypothetical_protein_KGM_22654_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008768 F UDP-sugar diphosphatase activity
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0046872 F metal ion binding
GO:0047631 F ADP-ribose diphosphatase activity
GO:0070062 C extracellular exosome
FPKM:7.68 TPM:7.11
1890 A_BomaMG_comp12046_c0_seq1
983bp
WD-40_repeat-containing_protein,_partial_[Reticulomyxa_filosa]
FPKM:15.12 TPM:14.00
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