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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12019_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_m7GpppX_diphosphatase_[Papilio_polytes]
Ontology
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000340 F RNA 7-methylguanosine cap binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0036245 P cellular response to menadione
GO:0043069 P negative regulation of programmed cell death
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0050072 F m7G(5')pppN diphosphatase activity
Transcript
Level		FPKM:17.84 TPM:16.52
ORF Entry
Sequence
(Nucleotide)
GTCCGACGGCTGCCTAAAAGACGATGTTAGCGAGCAGCGTTGTAAAAGGTTGAAAATTGA
CAATGAAAACGGCAACAATATAAATGATAATCAGTTAGAATTGAAAGACTTTGTTTTGGA
GAAAATATTGAACAATAACACTAACAGGAAAACAGCTTGTGTGGTTGGAAAATTCAAAGA
CAAAAGTGGCGTGGCGCTAATCCTATTCGAAAAAAATGCTTTCAAGGAAAATGACCTAAG
TGAAGAGGGTTATTTCTCCAAAGAAACTCAGCTGAAAACGTTTTTCGAGAACGATATTTA
CGGAAACTTCGAGTGTTTCCCGCCTTCAACTATAAACGGTGTGAAAACTACCATAATCTA
CCCAGCCACTGATAAGCATATTGCCAAATTTAGCCAGCAAGAAGTTCATATTGTACTGGA
GACTCCAGAGTTATATAAAGAACTGACATTGCCTCATCTAGAGAAAGAACAGTTCAATTT
GCAGTGGGTGTACAACATTCTAGAAGGTAAAAGTGAGCAAGATAGAATTGTACATGACAA
TAAAAGTGAAAAGGAAGGATTTGTGCTCCTCCCCGATCTGAAGTGGGACGGTCTTACCAA
AGAGACATTGTATTTATTGGCTATTGTCAGACAAAGAGACATAAAAAGCCTTAGAGATTT
GGACGAGCAGCATTTACCATTATTAAAGAGGATTAGAGACGAGGGAAAGAAAACCATTTT
AGAAAAATATCAGGTGCCTGGAAGTCAATTGCGTATATATCTGCATTACCAGCCTTCTTT
CTACCATCTGCATATCCATTTCACTTATCTACGCCACGAGGCCCCTGGAATCTATGCAGA
GAAATCACATCTACTCGACACTGTCATTGACAACATTACAATGATGCCCGACTATTATAA
GAAAGCCACATTACCATTCACCATAAGAGAAATGGATAGTATTTTTAATATATATGAAAC
AAACAGACAAGTCAAACGCATACAAAACGCTGATCTAATTGTTAAGTAGATAATTTTTAT
AGACTAATTATTAAGTGAAAATGTTGATTGACAACGTTTTTATGGAGCTACGCTCGCGTT
TGCGTAGCTGCAACGTTTACATAACGACCGGTGTTGATTTTACTAAAGAAAATTGCAATT
TGAAAATTAGCATACAATCCGATTGCATTGTGTTAAATTGTTATATTGAAGATTTTGGTA
GCAAACGGAGAGATAGTCTTTCTTCAATCGAGAGTTTATCAGATTCATATGATGAAACAG
ACGAAGAACTCGATGTGTCCACTTATATACCGATATCAGAATTTTGTCATATAATTCCCA
ATTCAATGTCATGTTTGAGAATAGACAAAAATACAGTTTCTTTCAGAATCTTAACCGAAC
CAAAGAATGGTGGAAATTTTTATACAGAATTACTAACCCCTGGAAAACCTGAAAATTCTG
TGAAGAAACACAATCTAAAAATCAATATAAAAATCAGTGAAGAATTAAAAATTGTTTGCT
CAAACTGTTCAAATGTTTTATCTGATGGTTGTGTCAAATTCGACAGGATTTTAGAATTGC
CTTCTGCTAATTTGGACATGACAGAATGGTTCTGTCATGGACACAGTCATGAACACGGCC
ATGGAAATGAGGCAGATGTAGTTATAAAACAAAATAAATTAGATTTCCTATATCGATTAA
CATATTTCGTTATTGATCGATCAATCTTATCAGAGAAATCGAACAAATTTAATTCTAAAA
GGGAGGTATACCATTGCAGCCGTTGTTTGGCTTGGCTCGGTCTCAAAATCAAAGACACTG
TCAGACTTTACAATTCTGAAGTTAAAGTACACAACAATGAAAAAGAAGTACATATATTTT
CTTACGAAAACCAACCTGAAAACATACATGTCAATGATTTTATACAAACAATAGAAAGCA
TAACTGAAGATTTTAAAATTGGCTTCCAATATGCAGTGATGTGTAAAATTGTATTAGAAT
GCACAATATCAGCGGCTAAAAAGCAATATCTCTTAATCTGGATAATGGATAAAGAATTAC
AAGTATTGAAGAACAAAGAAAACGTTACTAACAATAAAATTGAATTGAAATCTAGTTTTG
TTACGAAAATACTTTACAAAATTGAGTTGGCGTTGAATGATGAAGTGGAAAATTGGTTAA
CGGACCCAGTTGTGGTTAATACGGAGATCTCTAAGAACATGTTCAGTGAAGGCATCGAAC
ATTTGCAAAAAATGGCATCGAAAGTTCCAGAATCGTTCCGTAACTCCAACGGTTTTCATG
TCAGTTACTTAAAAATTTAAACGGCATTAAATTGGG
(2316 bp)

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