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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
61 O_BomoMSG10055_internal:A_BomoMSG_c22416_g2_i2
112bp
 exportin-4_[Bombyx_mori]
GO:0005049 F nuclear export signal receptor activity
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
62 O_BomoMSG10056_5prime_partial:A_BomoMSG_c22419_g1_i1
123bp
 PREDICTED:_uncharacterized_protein_LOC106713858_[Papilio_machaon]
63 O_BomoMSG10057_5prime_partial:A_BomoMSG_c22419_g1_i1
111bp
 uncharacterized_protein_LOC101745986_isoform_X3_[Bombyx_mori]
GO:0002039 F p53 binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0035872 P nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0070417 P cellular response to cold
GO:0070936 P protein K48-linked ubiquitination
GO:1901797 P negative regulation of signal transduction by p53 class mediator
GO:1901981 F phosphatidylinositol phosphate binding
GO:1902042 P negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2000374 P regulation of oxygen metabolic process
GO:2001271 P negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis
64 O_BomoMSG10058_internal:A_BomoMSG_c22420_g1_i1
369bp
 DNA_replication_licensing_factor_Mcm2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0008283 P cell population proliferation
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0030261 P chromosome condensation
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0051301 P cell division
65 O_BomoMSG10059_internal:A_BomoMSG_c22420_g2_i2
134bp
 DNA_replication_licensing_factor_Mcm2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0008283 P cell population proliferation
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0030261 P chromosome condensation
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0051301 P cell division
66 O_BomoMSG1005_internal:A_BomoMSG_c4664_g1_i1
126bp
 hypothetical_protein_N339_12791,_partial_[Pterocles_gutturalis]
67 O_BomoMSG10060_5prime_partial:A_BomoMSG_c22420_g3_i1
255bp
 DNA_replication_licensing_factor_Mcm2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0008283 P cell population proliferation
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0030261 P chromosome condensation
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0051301 P cell division
68 O_BomoMSG10061_5prime_partial:A_BomoMSG_c22420_g3_i1
173bp
69 O_BomoMSG10062_3prime_partial:A_BomoMSG_c22422_g1_i1
142bp
70 O_BomoMSG10063_complete:A_BomoMSG_c22425_g1_i1
141bp
 uncharacterized_protein_LOC101742471_[Bombyx_mori]
71 O_BomoMSG10064_complete:A_BomoMSG_c22425_g1_i1
129bp
72 O_BomoMSG10065_complete:A_BomoMSG_c22425_g1_i1
122bp
73 O_BomoMSG10066_complete:A_BomoMSG_c22425_g1_i3
100bp
74 O_BomoMSG10067_complete:A_BomoMSG_c22426_g1_i1
206bp
 rRNA-processing_protein_FCF1_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
75 O_BomoMSG10068_internal:A_BomoMSG_c22427_g1_i1
300bp
 transcriptional_regulator_ATRX_[Bombyx_mori]
76 O_BomoMSG10069_3prime_partial:A_BomoMSG_c22427_g1_i1
204bp
77 O_BomoMSG1006_internal:A_BomoMSG_c4664_g1_i1
125bp
78 O_BomoMSG10070_3prime_partial:A_BomoMSG_c22429_g1_i1
150bp
 activin_receptor_type-1_isoform_X2_[Bombyx_mori]
79 O_BomoMSG10071_internal:A_BomoMSG_c22431_g1_i1
263bp
 uncharacterized_protein_LOC101739514_isoform_X1_[Bombyx_mori]
80 O_BomoMSG10072_3prime_partial:A_BomoMSG_c22432_g1_i1
318bp
 transcription_factor_Sp4_isoform_X1_[Bombyx_mori]
81 O_BomoMSG10073_complete:A_BomoMSG_c22432_g1_i1
103bp
82 O_BomoMSG10074_3prime_partial:A_BomoMSG_c22432_g1_i2
361bp
 transcription_factor_Sp4_isoform_X2_[Bombyx_mori]
83 O_BomoMSG10075_complete:A_BomoMSG_c22432_g1_i2
103bp
84 O_BomoMSG10076_3prime_partial:A_BomoMSG_c22433_g1_i1
210bp
 protein_psiQ_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
85 O_BomoMSG10077_5prime_partial:A_BomoMSG_c22433_g1_i1
109bp
86 O_BomoMSG10078_5prime_partial:A_BomoMSG_c22433_g2_i1
198bp
 Pacifastin-like_protease_inhibitor_cvp4_[Papilio_xuthus]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
87 O_BomoMSG10079_3prime_partial:A_BomoMSG_c22433_g2_i1
130bp
88 O_BomoMSG1007_5prime_partial:A_BomoMSG_c4664_g1_i1
121bp
 zinc_finger_protein_664-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
89 O_BomoMSG10080_5prime_partial:A_BomoMSG_c22433_g2_i2
202bp
 Pacifastin-like_protease_inhibitor_cvp4_[Papilio_xuthus]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
90 O_BomoMSG10081_3prime_partial:A_BomoMSG_c22433_g2_i2
134bp
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