Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
91	O_BomoMSG10082_complete:A_BomoMSG_c22435_g1_i1 222bp	Bomo_Chr21	ubiquitin-conjugating_enzyme_E2_J2-like_[Bombyx_mori]	GO:0000151 C ubiquitin ligase complex GO:0000166 F nucleotide binding GO:0000209 P protein polyubiquitination GO:0005524 F ATP binding GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0006986 P response to unfolded protein GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016567 P protein ubiquitination GO:0016740 F transferase activity GO:0030433 P ubiquitin-dependent ERAD pathway GO:0031625 F ubiquitin protein ligase binding GO:0061630 F ubiquitin protein ligase activity GO:0061631 F ubiquitin conjugating enzyme activity GO:1903955 P positive regulation of protein targeting to mitochondrion
92	O_BomoMSG10083_complete:A_BomoMSG_c22435_g1_i1 103bp	Bomo_Chr21
93	O_BomoMSG10084_5prime_partial:A_BomoMSG_c22436_g1_i1 341bp	Bomo_Chr11	uncharacterized_protein_C7orf26_homolog_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
94	O_BomoMSG10085_complete:A_BomoMSG_c22437_g1_i1 1161bp	Bomo_Chr4	manganese-transporting_ATPase_13A1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005524 F ATP binding GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006812 P cation transport GO:0006874 P cellular calcium ion homeostasis GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0016887 F ATP hydrolysis activity GO:0019829 F ATPase-coupled cation transmembrane transporter activity GO:0043231 C intracellular membrane-bounded organelle GO:0046872 F metal ion binding GO:0098655 P cation transmembrane transport
95	O_BomoMSG10086_complete:A_BomoMSG_c22437_g1_i1 137bp	Bomo_Chr4
96	O_BomoMSG10087_internal:A_BomoMSG_c22439_g1_i1 342bp	Bomo_Chr24	probable_basic-leucine_zipper_transcription_factor_G_[Bombyx_mori]
97	O_BomoMSG10088_complete:A_BomoMSG_c22439_g1_i1 105bp	Bomo_Chr24
98	O_BomoMSG10089_internal:A_BomoMSG_c22442_g1_i1 229bp	Bomo_Chr15	uncharacterized_protein_LOC105842887_[Bombyx_mori]
99	O_BomoMSG1008_3prime_partial:A_BomoMSG_c4672_g1_i1 99bp	Bomo_Chr24	EP300-interacting_inhibitor_of_differentiation_3_[Bombyx_mori]
100	O_BomoMSG10090_5prime_partial:A_BomoMSG_c22442_g1_i1 118bp	Bomo_Chr15
101	O_BomoMSG10091_3prime_partial:A_BomoMSG_c22443_g1_i1 396bp	Bomo_Chr5	cyclin_E_isoform_X1_[Bombyx_mori]	GO:0000082 P G1/S transition of mitotic cell cycle GO:0000278 P mitotic cell cycle GO:0001932 P regulation of protein phosphorylation GO:0005515 F protein binding GO:0005634 C nucleus GO:0006275 P regulation of DNA replication GO:0006974 P cellular response to DNA damage stimulus GO:0007049 P cell cycle GO:0007096 P regulation of exit from mitosis GO:0007155 P cell adhesion GO:0007259 P receptor signaling pathway via JAK-STAT GO:0007277 P pole cell development GO:0007307 P eggshell chorion gene amplification GO:0007400 P neuroblast fate determination GO:0007419 P ventral cord development GO:0007422 P peripheral nervous system development GO:0007423 P sensory organ development GO:0008360 P regulation of cell shape GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity GO:0019908 C nuclear cyclin-dependent protein kinase holoenzyme complex GO:0035019 P somatic stem cell population maintenance GO:0035736 P cell proliferation involved in compound eye morphogenesis GO:0042127 P regulation of cell population proliferation GO:0043065 P positive regulation of apoptotic process GO:0044719 P regulation of imaginal disc-derived wing size GO:0045035 P sensory organ precursor cell division GO:0045859 P regulation of protein kinase activity GO:0048477 P oogenesis GO:0048665 P neuron fate specification GO:0051301 P cell division GO:0060564 P negative regulation of ubiquitin protein ligase activity GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
102	O_BomoMSG10092_5prime_partial:A_BomoMSG_c22444_g2_i1 105bp	Bomo_Chr20
103	O_BomoMSG10093_complete:A_BomoMSG_c22445_g1_i1 283bp	Bomo_Chr7	gamma-taxilin_[Bombyx_mori]	GO:0005615 C extracellular space GO:0005737 C cytoplasm GO:0010976 P positive regulation of neuron projection development GO:0019905 F syntaxin binding GO:0030017 C sarcomere
104	O_BomoMSG10094_5prime_partial:A_BomoMSG_c22448_g1_i1 271bp	Bomo_Chr2	androgen-dependent_TFPI-regulating_protein_isoform_X1_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0016020 C membrane GO:0016021 C integral component of membrane
105	O_BomoMSG10095_complete:A_BomoMSG_c22448_g1_i2 178bp	Bomo_Chr2	androgen-dependent_TFPI-regulating_protein_isoform_X1_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0016020 C membrane GO:0016021 C integral component of membrane
106	O_BomoMSG10096_complete:A_BomoMSG_c22448_g1_i3 303bp	Bomo_Chr2	androgen-dependent_TFPI-regulating_protein_isoform_X2_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0016020 C membrane GO:0016021 C integral component of membrane
107	O_BomoMSG10097_complete:A_BomoMSG_c22449_g1_i1 1023bp	Bomo_Chr25	uncharacterized_protein_LOC101745223_isoform_X2_[Bombyx_mori]	GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0006810 P transport GO:0015031 P protein transport GO:0030121 C AP-1 adaptor complex GO:0030276 F clathrin binding GO:0043231 C intracellular membrane-bounded organelle GO:0046907 P intracellular transport
108	O_BomoMSG10098_internal:A_BomoMSG_c22453_g1_i1 108bp	Bomo_Chr25	RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Papilio_machaon]
109	O_BomoMSG10099_internal:A_BomoMSG_c22458_g1_i1 326bp	Bomo_Chr12	ATP-binding_cassette_sub-family_G_member_4_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005886 C plasma membrane GO:0006810 P transport GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016887 F ATP hydrolysis activity GO:0017127 F cholesterol transfer activity GO:0033344 P cholesterol efflux GO:0034041 F ABC-type sterol transporter activity GO:0042803 F protein homodimerization activity GO:0046982 F protein heterodimerization activity GO:0055085 P transmembrane transport
110	O_BomoMSG1009_internal:A_BomoMSG_c4677_g1_i1 264bp	Bomo_Chr15	E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]	GO:0005516 F calmodulin binding GO:0007275 P multicellular organism development GO:0007286 P spermatid development GO:0007291 P sperm individualization GO:0007399 P nervous system development GO:0007601 P visual perception GO:0008270 F zinc ion binding GO:0030154 P cell differentiation GO:0042065 P glial cell growth GO:0042066 P perineurial glial growth GO:0043186 C P granule GO:0046872 F metal ion binding GO:0050896 P response to stimulus
111	O_BomoMSG100_internal:A_BomoMSG_c361_g1_i1 119bp	Bomo_Scaf150	ORF2_[Bombyx_mori]	GO:0000287 F magnesium ion binding GO:0003676 F nucleic acid binding GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004523 F RNA-DNA hybrid ribonuclease activity GO:0005737 C cytoplasm GO:0006401 P RNA catabolic process GO:0016787 F hydrolase activity GO:0046872 F metal ion binding GO:0090305 P nucleic acid phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
112	O_BomoMSG10100_complete:A_BomoMSG_c22458_g1_i1 111bp	Bomo_Chr12
113	O_BomoMSG10101_3prime_partial:A_BomoMSG_c22458_g1_i2 485bp	Bomo_Chr12	ATP-binding_cassette_sub-family_G_member_4_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005886 C plasma membrane GO:0006810 P transport GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016887 F ATP hydrolysis activity GO:0017127 F cholesterol transfer activity GO:0033344 P cholesterol efflux GO:0034041 F ABC-type sterol transporter activity GO:0042803 F protein homodimerization activity GO:0046982 F protein heterodimerization activity GO:0055085 P transmembrane transport
114	O_BomoMSG10102_complete:A_BomoMSG_c22458_g1_i2 111bp	Bomo_Chr12
115	O_BomoMSG10103_complete:A_BomoMSG_c22459_g1_i1 656bp	Bomo_Chr3	succinate_dehydrogenase_[ubiquinone]_flavoprotein_subunit,_mitochondrial_[Bombyx_mori]	GO:0004776 F succinate-CoA ligase (GDP-forming) activity GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005749 C mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) GO:0006099 P tricarboxylic acid cycle GO:0008177 F succinate dehydrogenase (ubiquinone) activity GO:0016020 C membrane GO:0016491 F oxidoreductase activity GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors GO:0022900 P electron transport chain GO:0050660 F flavin adenine dinucleotide binding GO:0055114 P obsolete oxidation-reduction process
116	O_BomoMSG10104_complete:A_BomoMSG_c22459_g1_i1 117bp	Bomo_Chr3
117	O_BomoMSG10105_complete:A_BomoMSG_c22459_g1_i1 112bp	Bomo_Chr3	unknown_[Saccharomyces_cerevisiae]
118	O_BomoMSG10106_internal:A_BomoMSG_c22460_g1_i1 245bp	Bomo_Chr17	mitochondrial_dicarboxylate_carrier_[Bombyx_mori]	GO:0003735 F structural constituent of ribosome GO:0005634 C nucleus GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006412 P translation GO:0006810 P transport GO:0006817 P phosphate ion transport GO:0006839 P mitochondrial transport GO:0008272 P sulfate transport GO:0015114 F phosphate ion transmembrane transporter activity GO:0015116 F sulfate transmembrane transporter activity GO:0015117 F thiosulfate transmembrane transporter activity GO:0015140 F malate transmembrane transporter activity GO:0015141 F succinate transmembrane transporter activity GO:0015291 F secondary active transmembrane transporter activity GO:0015297 F antiporter activity GO:0015709 P thiosulfate transport GO:0015743 P malate transport GO:0015744 P succinate transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0031966 C mitochondrial membrane GO:0035435 P phosphate ion transmembrane transport GO:0055085 P transmembrane transport GO:0071422 P succinate transmembrane transport GO:0071423 P malate transmembrane transport GO:1902358 P sulfate transmembrane transport
119	O_BomoMSG10107_3prime_partial:A_BomoMSG_c22460_g1_i2 271bp	Bomo_Chr17	mitochondrial_dicarboxylate_carrier_[Bombyx_mori]	GO:0003735 F structural constituent of ribosome GO:0005634 C nucleus GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006412 P translation GO:0006810 P transport GO:0006817 P phosphate ion transport GO:0006839 P mitochondrial transport GO:0008272 P sulfate transport GO:0015114 F phosphate ion transmembrane transporter activity GO:0015116 F sulfate transmembrane transporter activity GO:0015117 F thiosulfate transmembrane transporter activity GO:0015140 F malate transmembrane transporter activity GO:0015141 F succinate transmembrane transporter activity GO:0015291 F secondary active transmembrane transporter activity GO:0015297 F antiporter activity GO:0015709 P thiosulfate transport GO:0015743 P malate transport GO:0015744 P succinate transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0031966 C mitochondrial membrane GO:0035435 P phosphate ion transmembrane transport GO:0055085 P transmembrane transport GO:0071422 P succinate transmembrane transport GO:0071423 P malate transmembrane transport GO:1902358 P sulfate transmembrane transport
120	O_BomoMSG10108_internal:A_BomoMSG_c22464_g1_i1 437bp	Bomo_Chr21	dmX-like_protein_2_[Bombyx_mori]	GO:0005615 C extracellular space GO:0008021 C synaptic vesicle GO:0008150 P biological_process GO:0016020 C membrane GO:0017137 F small GTPase binding GO:0030054 C cell junction GO:0030672 C synaptic vesicle membrane GO:0031410 C cytoplasmic vesicle GO:0045202 C synapse