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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1471 A_BomoOtmSK_comp1050309_c0_seq1
252bp
FPKM:0.59 TPM:0.63
1472 A_BomoOtmSK_comp1050354_c0_seq1
220bp
FPKM:1.89 TPM:2.04
1473 A_BomoOtmSK_comp1050372_c0_seq1
373bp
FPKM:0.90 TPM:0.97
1474 A_BomoOtmSK_comp1050376_c0_seq1
214bp
 apoptosis-resistant_E3_ubiquitin_protein_ligase_1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043066 P negative regulation of apoptotic process
FPKM:2.11 TPM:2.28
1475 A_BomoOtmSK_comp1050411_c0_seq1
314bp
FPKM:0.65 TPM:0.70
1476 A_BomoOtmSK_comp1050419_c0_seq1
215bp
FPKM:1.04 TPM:1.12
1477 A_BomoOtmSK_comp1050468_c0_seq1
201bp
FPKM:2.79 TPM:3.00
1478 A_BomoOtmSK_comp1050474_c0_seq1
598bp
 PREDICTED:_piggyBac_transposable_element-derived_protein_3-like_isoform_X1_[Octopus_bimaculoides]
FPKM:0.52 TPM:0.56
1479 A_BomoOtmSK_comp1050484_c0_seq1
218bp
 semaphorin-2A_isoform_X2_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
FPKM:1.96 TPM:2.11
1480 A_BomoOtmSK_comp10504_c0_seq1
5072bp
 PREDICTED:_muscle_M-line_assembly_protein_unc-89_isoform_X2_[Papilio_machaon]
GO:0004672 F protein kinase activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017048 F small GTPase binding
GO:0019902 F phosphatase binding
GO:0030241 P skeletal muscle myosin thick filament assembly
GO:0031034 P myosin filament assembly
GO:0031430 C M band
GO:0031672 C A band
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:79.18 TPM:85.36
1481 A_BomoOtmSK_comp10504_c0_seq2
5321bp
 LOW_QUALITY_PROTEIN:_obscurin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000794 C condensed nuclear chromosome
GO:0002020 F protease binding
GO:0002576 P platelet degranulation
GO:0003300 P cardiac muscle hypertrophy
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005859 C muscle myosin complex
GO:0005865 C striated muscle thin filament
GO:0006468 P protein phosphorylation
GO:0006936 P muscle contraction
GO:0006941 P striated muscle contraction
GO:0007076 P mitotic chromosome condensation
GO:0008307 F structural constituent of muscle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0030018 C Z disc
GO:0030049 P muscle filament sliding
GO:0030240 P skeletal muscle thin filament assembly
GO:0030241 P skeletal muscle myosin thick filament assembly
GO:0031430 C M band
GO:0031433 F telethonin binding
GO:0031674 C I band
GO:0035995 P detection of muscle stretch
GO:0042802 F identical protein binding
GO:0042805 F actinin binding
GO:0043621 F protein self-association
GO:0045214 P sarcomere organization
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
GO:0048739 P cardiac muscle cell development
GO:0048769 P sarcomerogenesis
GO:0050790 P regulation of catalytic activity
GO:0051015 F actin filament binding
GO:0051371 F muscle alpha-actinin binding
GO:0051592 P response to calcium ion
GO:0055003 P cardiac myofibril assembly
GO:0055008 P cardiac muscle tissue morphogenesis
GO:0060048 P cardiac muscle contraction
GO:0070062 C extracellular exosome
GO:0097493 F structural molecule activity conferring elasticity
FPKM:42.89 TPM:46.24
1482 A_BomoOtmSK_comp1050531_c0_seq1
252bp
 conserved_hypothetical_protein_[Wolbachia_endosymbiont_of_Drosophila_ananassae]
FPKM:0.00 TPM:0.00
1483 A_BomoOtmSK_comp1050539_c0_seq1
206bp
FPKM:1.25 TPM:1.34
1484 A_BomoOtmSK_comp1050540_c0_seq1
269bp
FPKM:0.48 TPM:0.52
1485 A_BomoOtmSK_comp1050542_c0_seq1
293bp
FPKM:0.38 TPM:0.41
1486 A_BomoOtmSK_comp1050553_c0_seq1
220bp
FPKM:1.89 TPM:2.04
1487 A_BomoOtmSK_comp1050570_c0_seq1
329bp
FPKM:0.58 TPM:0.63
1488 A_BomoOtmSK_comp10505_c0_seq1
490bp
FPKM:1.68 TPM:1.81
1489 A_BomoOtmSK_comp1050603_c0_seq1
215bp
FPKM:2.07 TPM:2.23
1490 A_BomoOtmSK_comp1050643_c0_seq1
211bp
FPKM:1.12 TPM:1.21
1491 A_BomoOtmSK_comp1050652_c0_seq1
230bp
 synaptic_vesicle_2-related_protein_isoform_X2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008514 F organic anion transmembrane transporter activity
GO:0015711 P organic anion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:1.60 TPM:1.72
1492 A_BomoOtmSK_comp1050666_c0_seq1
404bp
FPKM:0.58 TPM:0.63
1493 A_BomoOtmSK_comp105067_c0_seq1
2659bp
FPKM:2.90 TPM:3.13
1494 A_BomoOtmSK_comp10506_c0_seq1
3997bp
 guanine_nucleotide-releasing_factor_2_isoform_X16_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0007264 P small GTPase mediated signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007275 P multicellular organism development
GO:0007525 P somatic muscle development
GO:0016203 P muscle attachment
GO:0017034 F guanyl-nucleotide exchange factor activity
GO:0017124 F SH3 domain binding
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045214 P sarcomere organization
FPKM:2.13 TPM:2.30
1495 A_BomoOtmSK_comp10506_c0_seq2
4042bp
 guanine_nucleotide-releasing_factor_2_isoform_X16_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0007264 P small GTPase mediated signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007275 P multicellular organism development
GO:0007525 P somatic muscle development
GO:0016203 P muscle attachment
GO:0017034 F guanyl-nucleotide exchange factor activity
GO:0017124 F SH3 domain binding
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045214 P sarcomere organization
FPKM:1.52 TPM:1.63
1496 A_BomoOtmSK_comp1050735_c0_seq1
353bp
FPKM:0.25 TPM:0.27
1497 A_BomoOtmSK_comp10507_c0_seq1
728bp
FPKM:1.50 TPM:1.62
1498 A_BomoOtmSK_comp1050824_c0_seq1
444bp
 uncharacterized_protein_LOC110380815_[Helicoverpa_armigera]
FPKM:0.82 TPM:0.89
1499 A_BomoOtmSK_comp1050858_c0_seq1
282bp
FPKM:1.27 TPM:1.37
1500 A_BomoOtmSK_comp1050898_c0_seq1
246bp
FPKM:1.26 TPM:1.36
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