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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10504_c0_seq2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_obscurin_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000794 C condensed nuclear chromosome
GO:0002020 F protease binding
GO:0002576 P platelet degranulation
GO:0003300 P cardiac muscle hypertrophy
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005859 C muscle myosin complex
GO:0005865 C striated muscle thin filament
GO:0006468 P protein phosphorylation
GO:0006936 P muscle contraction
GO:0006941 P striated muscle contraction
GO:0007076 P mitotic chromosome condensation
GO:0008307 F structural constituent of muscle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0030018 C Z disc
GO:0030049 P muscle filament sliding
GO:0030240 P skeletal muscle thin filament assembly
GO:0030241 P skeletal muscle myosin thick filament assembly
GO:0031430 C M band
GO:0031433 F telethonin binding
GO:0031674 C I band
GO:0035995 P detection of muscle stretch
GO:0042802 F identical protein binding
GO:0042805 F actinin binding
GO:0043621 F protein self-association
GO:0045214 P sarcomere organization
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
GO:0048739 P cardiac muscle cell development
GO:0048769 P sarcomerogenesis
GO:0050790 P regulation of catalytic activity
GO:0051015 F actin filament binding
GO:0051371 F muscle alpha-actinin binding
GO:0051592 P response to calcium ion
GO:0055003 P cardiac myofibril assembly
GO:0055008 P cardiac muscle tissue morphogenesis
GO:0060048 P cardiac muscle contraction
GO:0070062 C extracellular exosome
GO:0097493 F structural molecule activity conferring elasticity
Transcript
Level		FPKM:42.89 TPM:46.24
ORF EntryO_BomoOtmSK5575_complete:A_BomoOtmSK_comp10504_c0_seq2
Sequence
(Nucleotide)
GTTTGGTGGTGTTCTAAGTTTAGCCGGCGCTCGGTCCGGTACCGGCTGAGGGGCAGTCGC
TCGGGATCCGCGGCAGCGTCCACCTCGCTCCCTCCAGCGCTATACGACCTCCGACCACTC
GTCCGAGTGAAGTGTGTGATGTGATTGTGTTTCTTGTGATACCTTGATGCGAACAGGATC
TAGCAGACAGTCTCGGCGACGATAAGGGTATAACTGAACATCTAAAGCTTCCGATACAAA
GGATCAACGACTACCAGCTTCTTCTGAAGGAGCTAGTGAAGTATTCGAGACGTCTCGGCG
AAGACTGTAACGACCTCCAGAAGGCTCTAGAACTATTTCTTGGCGTTCCGAATCGCGCCA
CTGACAACAAATTCTTAGCCTCCATCGAAGGATTTAGAGGCAACATCTATAAACTAGGAA
GACTTCTCACCCACGACTGGTTTACCGTCACCGACCAGGAAGGCAGGACCAAGGATCGGT
ATCTTTTCCTCTTCAAAGCGAGGATCTTGGTCTGCAAAGTCAAGAGGATATCTGAGGACA
GATCTGTCTTCGTTCTGAAGGATATCATCAAGCTCCCTGAAGTCGAAGTGAAGGAAGTGA
CCGGAGAACCATTGAAGTTCGAACTTCGCCAGAAAAATCCACCGCTTGATTTGATCCTCG
GTGCTCACAAGGAGCACGTGAAGAATACTTGGTTAGCTGAAATCAACAAACACGCTTCGG
ACATCGTTGCCCTTGCGGAACACGCAGCAGATGACCTTCAAGTTCTTCAGGCCGTAGAAA
CCAAAGAAACTGCGGAAGAGAAGAAGAAGAAGCGCGAACATACAGAAGAGGTTATCGTTA
AAGCAGAGCAAGAGGTGAAAGAGAAACGATCCCGCACCGAAGACATTGAAGTCACCCAGG
TTTCGGTTAAAGAAGAAACTTCCCAGCAAGTAAAAGTCAAAAGAAAAGCATCTGTTGAGA
GCACAGTTGCTACTAAAATCTCCAAATCAGAAGTCGTAGAAGTGTCCTCTCTTAACGAGA
ACCAGGAATCTGTCGTTAGCGCAATCGACACTGAAGTGAGAAGTGACGTCACAACTGATT
TAGAAACTAAATCATCAGTGACTGTAAGCGCTCTGAACGCCGAGACTGAACCTGTTACAT
CACAATTGGAAAGTCAACAAATTTTAAAAACTGAGCATACAGAAGCAAAAGTAGAAGAAC
AAATTGTTCAAGCGTCTCAAACGACTGAAGAATATGTTGAAAAATCAATAGAAACTACTA
AGCAATCATCTGTAGTTGAAACGACAGAATCATTTCAAGAGATAAGATCTCTCGAACAAG
ACTCTACAAAAATCTCAACAGAAGATAGAATTACAGTTCGAGAAGAAGAAGAACCAATCC
ACGCCATTCAAGAGTGTACAAACGCACAAGAGAGATCAGACGAGTCATTTGAAACTGTTA
AACAAATCCCTGAAATATCAAAAGAAACAGCGGAGAACGAAATATTAGAAACAACAAAAG
AATCATCTGAAACTGTTATTCAAGTTTCAGAATCTCTTAGTGAAACTGTTTCTGAAACTG
TGATAGCTGTTTCCGAAACTGAAGAAACATTGCAAACGCTTGAACAGAAAGATTCTACAA
CTCCCCCAGCAGACCAGATAGCGACCGCTGTTTTAAAGCCTACTACAGCTGAGGCAATAG
AAGAAAGTGTGCAAAGACAACAGACTTTGCAAGAAGTTAAATTAGAAGAACACATTAGTG
AGACTGCTTCAGCCCTAAATCAAGAAACAAAAATCCTAGAAATATCTGAACAAAAATCTG
AACAGACTGTTAATTTCGAGAGCGTAGCTAAAGAATCCAAAGAATTTGAACTAAACGCTA
CTGAAGAAGTTAAAAAATTAGTTGGAAAGGCACACGAGGAAAGCGCTTCTGCAGGCGGTC
AAACTGTAACCACAGAGGAGATTGGTGACGACGAGATGTCGAGGTATAGCCGCAGTTCGC
GGATATCTGGAGAGTACTCCAGCAGCGCTAGAAAATCATCTACTGGTGGACGATATGAGT
CCTCTACTTATGACAGCACTGGTCTATCATCATATTCACGCCGCGAGAGCGGATCACGTC
TCGAAAGTGCGAGATATGAAACTGGCGGATCTACTGAAGGCGGAGTCTCCTCGCGCTACG
AATCTAAGTACTCGAGCTCATCAAAGATAGAAGGAGGTTCCAAATATGGCATTGAGTCTA
GCTATGAAAGCAAAGTAGACGGATCCAAATACGGAATTGATTATGACTCCAGCAGCAAAC
GCAATAGCATTGCTTCTAAATATGGGGTCGAAGCTGAAACGAACAGCAAAATTGATGGAA
TTGCATCAAAATATGCCATCGAGTCAGAAACTACAAGCAAAATTGACAGCATTGCTAATA
AATACGGAATTGATACCGAAAAAGCAAGCAAGATTGATGGGACCGCATCTAAATATGGAG
TAGAATCAGAAACCACAAGCAAAATTGATAGTATTGCTTCTAAATATAGGAAAGAATCCG
AGGGCTCCATCAAAGTTGATATGGTTTCGTCTAAGTATGGCGTGGAATCTGAAACGTCTA
GTAAAATTGACAGTATTGCATCAAAGTATGGCATTGAATCAAAATACGAAGCTGAAGGAC
GTTCATCTAAATATAGCTCTCAAATCAGTTATGACGGCAATAAGGTTGACGGTGTATCTA
CTAAGTTAGAAAGTAGTTTCGAGAGTTCTAGTAATGGAAGCTCTGTCTACGAGAGCAAAT
ACTCAAAGCGAGCCATTTCCAACGGCGTACATTCTGAAGAGTCTGAATTACAGAGGTCTA
TTTCCAAGTCTGAAGCTCAGGATGGAAGACCAGTGTTCTCAAAAACTCTCGAAGGCCAAA
ACATCGAGCCTGGTGAGAACGCGGTCTTCGAATGCGTTCTACGCGAGTCGTCGGATTTGG
TGAATGTGACCTGGCTCAAGGACAACAAGCCGATTACCGATCGGCTCATGGACCGTTGCT
CCATATCATATGATCCAGACGGCAGCCACCGCCTTGAACTGAAACATTGCAGAGAAGATG
ACTCTGGAGTTTATACAGCCCGAGCTGAAAACATCAAAGGAAACGCCCATTGCACAGCTC
AGTTAGTCGTCCACGAGTTGACGCCGGAAGAAAGAAAGCAGAGGAATGCTCTAAACGCTC
CGTACTTCTTAGTAGCCTTGAAGGACACTGAGATCATGGAAAATACCTACTTGCGTTTCA
TGATCAGAGTCAAGGGCAATCCCAACCCAGAAGTTAAGTTCTACCGCGACGACAAAGAGA
TCGTGGCGAAGTCGGATACGGACCGCATCTCCATCATCACGACCCGCGCCGACCGCGGCT
GCTACGAACTGGTGATCCCAGACGTGACTCCAGCCGATGCGGGGAAATACTCCTGCAGAG
CTATGAATATTTACGGCGATGTCGTTTCTGAAGCTAAAGTTACCGTTGTTGATGACAAAA
ACATATTTGGTGAACTGCTTCCTGGTGGTGATGGTCTGCTGGCTAAAGGCGAGAAGCCAG
CTTTCACGTGGAAGAAAGATGGACAGCCCTACGATCCTGAAGAACGATTCAAGGTTCTTC
TTGGTGACGACGAAGACTCCCTCGCGCTAGTGTTCCAGCACGTGAAGCCGGAGGATGCTG
GGTTGTACACGTGTGTGGCTAAGACCAGTACAGGAAATATATCTTGCTCAGCCGAGCTTA
CAGTTCAAGGTGCCGTGAACGAACTTCACCGGGAGCCAGAGAAGCCGACCCTGGTGATCG
AGCATCGGGACGCTATCGTCTCGATGGGCGCGTCAGCCATGCTGGAGCTACAATGCAAGG
GCTTCCCGAAGCCGAGTGTCGTGTTCAAGCATGACGGGAAGGTGGTGGAACCGGACACCA
GACATAAGTTCCTGTACGAGGATGAAGAGAGCATGTCTCTTGTGATAAAGAACGTGACGT
CAGCAGATGCCGGAGAGTACCAGGTGACGGCCAGCAATGAGCTCGGTGAAGACACTTCCA
CCATGAACCTAGTGGTGAAGGCGCCGCCGAAATTTAAGAAGAAGATCGAAAATCAAACCT
GCATGGTCGGCACGACTCACACCGTGATAATAGAAGTGGAAGGAACACCTTCACCAGACC
TGACATTCTACAAGGACGGAACTGAAATCAAGAGCTCCGAACGCATACAAATCGTTAAAG
AGAGTGAGGAAATATACAAGATCACAATTAAAGATGCCAAGTTGACCGACACCGGATCGT
ATTCTGTAGTAGCTAAGAACGAAGTGAACCAATGCTCTGAGTTCTGGCAATGGCACGTGA
CGTCACCGCCCCGACTCGTGAAGAAGCTGGGCGGCTCCAAGGTCGTCGACGAGAAGGAGA
CAGTCACCTTCAGCATCGAGACCGAAGCTGAACCGGCACCGACTGTCAAATGGTTCAAGA
ATAAGACGGAATTGACGGAGTCGTCAACGGTGAAGATCTCATCATCCGGGTCGGCTCACT
CCCTCGTGATCACGTCTGCCGCAAGGGCTGATGCTGGAGAGTATTCTTGTGAGGTACGTA
ACGTGCACGGCGTGGCGAGTGACGTCAGCACATTGAACGTCCGCTGCGGTCCGGTGTTCA
CGGAGCGCCTGCGTGACGTCACGGCCAGCGAGGGTGACGTCAACGTCGAGTTCACGGTCG
CCGTCGACGCATTCCCACAACCCACCATTCGATGGTACTTGGGAGACGTGGAGGTCACAG
AAAAGAAGTCTGTGTTCACTCGCGTGGATAGCGGCAACACGCACAAGCTGATCCTCAAGG
AAGTGTCGGCTGAATATTCCGGACAGTACACATGTAAAGTTTCCAACGAACTGGGGGATG
ACTCCTGCCAGGCAACTTTCACTGTTAACAGAAAACCTCGGTTCACTAAGAGCCTGGTGG
ATATGACCGTCGACGCAGGTCAGACCCTAAAACTTGATGTGGAAGTCGAGGGCAGCCCGG
AACCCAAGGTTCGTTGGTTTAAAGACGGAAAAGAAGTCACTACTGATGCCAGAATTAAAA
TAGAAAGAGACACTAAGAGGCTCGAAAATTATCATGTCACGGTGACATTAGTGAAGGAGG
AAGACGGTGGCGAATACGAAGTTAAAGCTGAGAATGAGATGGGAAGCGTGTCATCGAAGA
GTACAGTCACAGTCCACACGAGGGAAGTCCACTCGAGGATCACTAAGGAAGAAGTGGAAA
GTGAAATTGATGCGAAGGCAAAACAACCTTTAGAGGAAGAAGTTGAAAGTTCAATAACGG
GGGAAGTTCACTCGAAGATCACTAAGGAAGAAATGCAAAGT
(5321 bp)

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