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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1441 A_BomoOtmSK_comp1049693_c0_seq1
252bp
FPKM:1.17 TPM:1.26
1442 A_BomoOtmSK_comp10496_c0_seq1
565bp
FPKM:4.51 TPM:4.86
1443 A_BomoOtmSK_comp1049718_c0_seq1
215bp
 chitinase-related_protein_1_precursor_[Danaus_plexippus_plexippus]
FPKM:2.07 TPM:2.23
1444 A_BomoOtmSK_comp1049750_c0_seq1
304bp
 PREDICTED:_uncharacterized_protein_LOC105232370_[Bactrocera_dorsalis]
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0000781 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005657 C replication fork
GO:0005694 C chromosome
GO:0005724 C obsolete nuclear telomeric heterochromatin
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010521 F telomerase inhibitor activity
GO:0016787 F hydrolase activity
GO:0032211 P negative regulation of telomere maintenance via telomerase
GO:0032508 P DNA duplex unwinding
GO:0043141 F 5'-3' DNA helicase activity
GO:0044806 P G-quadruplex DNA unwinding
GO:0051880 F G-quadruplex DNA binding
GO:0051974 P negative regulation of telomerase activity
GO:0097046 P replication fork progression beyond termination site
FPKM:0.70 TPM:0.76
1445 A_BomoOtmSK_comp1049780_c0_seq1
325bp
FPKM:0.90 TPM:0.97
1446 A_BomoOtmSK_comp1049788_c0_seq1
422bp
FPKM:0.72 TPM:0.78
1447 A_BomoOtmSK_comp1049799_c0_seq1
222bp
FPKM:1.82 TPM:1.97
1448 A_BomoOtmSK_comp10497_c0_seq1
478bp
FPKM:3.21 TPM:3.46
1449 A_BomoOtmSK_comp1049875_c0_seq1
247bp
FPKM:0.62 TPM:0.67
1450 A_BomoOtmSK_comp1049895_c0_seq1
423bp
FPKM:0.90 TPM:0.97
1451 A_BomoOtmSK_comp10498_c0_seq1
428bp
 uncharacterized_protein_LOC110385588_[Bombyx_mori]
FPKM:2.46 TPM:2.65
1452 A_BomoOtmSK_comp10498_c1_seq1
302bp
 uncharacterized_protein_LOC110385588_[Bombyx_mori]
FPKM:2.49 TPM:2.69
1453 A_BomoOtmSK_comp1049946_c0_seq1
222bp
 hypothetical_protein_AB894_15365,_partial_[Piscirickettsia_salmonis]
FPKM:0.91 TPM:0.98
1454 A_BomoOtmSK_comp1049951_c0_seq1
254bp
FPKM:1.71 TPM:1.85
1455 A_BomoOtmSK_comp1049983_c0_seq1
219bp
FPKM:1.92 TPM:2.07
1456 A_BomoOtmSK_comp10499_c0_seq1
1642bp
 protein_vein_[Bombyx_mori]
GO:0005154 F epidermal growth factor receptor binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007267 P cell-cell signaling
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007477 P notum development
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007482 P haltere development
GO:0007494 P midgut development
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0008284 P positive regulation of cell population proliferation
GO:0008355 P olfactory learning
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016203 P muscle attachment
GO:0030031 P cell projection assembly
GO:0035310 P notum cell fate specification
GO:0035556 P intracellular signal transduction
GO:0043066 P negative regulation of apoptotic process
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
FPKM:1.04 TPM:1.12
1457 A_BomoOtmSK_comp10499_c1_seq1
335bp
FPKM:1.40 TPM:1.51
1458 A_BomoOtmSK_comp1050062_c0_seq1
294bp
 NADH_dehydrogenase_[ubiquinone]_1_beta_subcomplex_subunit_7-like_[Bombyx_mori]
GO:0003954 F NADH dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:1.14 TPM:1.23
1459 A_BomoOtmSK_comp1050077_c0_seq1
207bp
FPKM:1.22 TPM:1.31
1460 A_BomoOtmSK_comp10500_c0_seq1
1249bp
 sid-1-related_gene1_precursor_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0003323 P type B pancreatic cell development
GO:0003674 F molecular_function
GO:0003725 F double-stranded RNA binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0009749 P response to glucose
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033227 P dsRNA transport
GO:0042593 P glucose homeostasis
GO:0044342 P type B pancreatic cell proliferation
GO:0051033 F RNA transmembrane transporter activity
GO:0061178 P regulation of insulin secretion involved in cellular response to glucose stimulus
FPKM:0.82 TPM:0.88
1461 A_BomoOtmSK_comp10500_c0_seq2
1181bp
 sid-1-related_gene1_precursor_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033227 P dsRNA transport
GO:0051033 F RNA transmembrane transporter activity
FPKM:1.26 TPM:1.36
1462 A_BomoOtmSK_comp10500_c0_seq3
1204bp
 sid-1-related_gene1_precursor_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0003323 P type B pancreatic cell development
GO:0003674 F molecular_function
GO:0003725 F double-stranded RNA binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0009749 P response to glucose
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033227 P dsRNA transport
GO:0042593 P glucose homeostasis
GO:0044342 P type B pancreatic cell proliferation
GO:0051033 F RNA transmembrane transporter activity
GO:0061178 P regulation of insulin secretion involved in cellular response to glucose stimulus
FPKM:1.89 TPM:2.04
1463 A_BomoOtmSK_comp1050169_c0_seq1
299bp
 hypothetical_protein_RR48_07449_[Papilio_machaon]
FPKM:0.73 TPM:0.79
1464 A_BomoOtmSK_comp10501_c0_seq1
1212bp
 uridine_phosphorylase_1_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004850 F uridine phosphorylase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006218 P uridine catabolic process
GO:0006220 P pyrimidine nucleotide metabolic process
GO:0009116 P nucleoside metabolic process
GO:0009166 P nucleotide catabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016763 F pentosyltransferase activity
GO:0042149 P cellular response to glucose starvation
GO:0043097 P pyrimidine nucleoside salvage
GO:0044206 P UMP salvage
GO:0046108 P uridine metabolic process
GO:0046135 P pyrimidine nucleoside catabolic process
FPKM:5.67 TPM:6.11
1465 A_BomoOtmSK_comp1050215_c0_seq1
259bp
FPKM:1.61 TPM:1.74
1466 A_BomoOtmSK_comp1050281_c0_seq1
270bp
FPKM:0.48 TPM:0.51
1467 A_BomoOtmSK_comp10502_c0_seq1
1153bp
 Fanconi_anemia,_complementation_group_L_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007276 P gamete generation
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0042127 P regulation of cell population proliferation
GO:0043240 C Fanconi anaemia nuclear complex
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0098792 P xenophagy
FPKM:0.00 TPM:0.00
1468 A_BomoOtmSK_comp10502_c0_seq2
609bp
 Fanconi_anemia,_complementation_group_L_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007276 P gamete generation
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0042127 P regulation of cell population proliferation
GO:0043240 C Fanconi anaemia nuclear complex
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0098792 P xenophagy
FPKM:0.78 TPM:0.84
1469 A_BomoOtmSK_comp10502_c0_seq3
1232bp
 Fanconi_anemia,_complementation_group_L_isoform_X1_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007276 P gamete generation
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0042127 P regulation of cell population proliferation
GO:0043240 C Fanconi anaemia nuclear complex
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0098792 P xenophagy
FPKM:3.36 TPM:3.62
1470 A_BomoOtmSK_comp10502_c0_seq4
688bp
 Fanconi_anemia,_complementation_group_L_isoform_X1_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007276 P gamete generation
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0042127 P regulation of cell population proliferation
GO:0043240 C Fanconi anaemia nuclear complex
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0098792 P xenophagy
FPKM:2.88 TPM:3.10
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