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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
361 A_BomoMSG_c10412_g1_i1
210bp
FPKM:4.74 TPM:2.47
362 A_BomoMSG_c10412_g2_i1
290bp
 Vacuolar_protein_sorting-associated_protein_13C_[Operophtera_brumata]
FPKM:1.28 TPM:0.67
363 A_BomoMSG_c10413_g1_i1
296bp
FPKM:2.05 TPM:1.07
364 A_BomoMSG_c10414_g1_i1
670bp
 Gag-pol_polyprotein,_partial_[Operophtera_brumata]
FPKM:2.42 TPM:1.26
365 A_BomoMSG_c10416_g1_i1
601bp
FPKM:3.45 TPM:1.80
366 A_BomoMSG_c10417_g1_i1
480bp
FPKM:3.09 TPM:1.61
367 A_BomoMSG_c10417_g1_i2
494bp
FPKM:0.00 TPM:0.00
368 A_BomoMSG_c10419_g1_i1
524bp
 anaphase-promoting_complex_subunit_5_isoform_X1_[Bombyx_mori]
FPKM:2.72 TPM:1.42
369 A_BomoMSG_c1041_g1_i1
230bp
FPKM:3.67 TPM:1.91
370 A_BomoMSG_c10420_g1_i1
1390bp
 PDZ_and_LIM_domain_protein_Zasp_isoform_X1_[Helicoverpa_armigera]
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
FPKM:54.31 TPM:28.25
371 A_BomoMSG_c10421_g1_i1
566bp
FPKM:7.34 TPM:3.82
372 A_BomoMSG_c10422_g1_i1
337bp
FPKM:4.81 TPM:2.50
373 A_BomoMSG_c10423_g1_i1
239bp
 protein_unc-80_homolog_[Bombyx_mori]
GO:0005261 F cation channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034703 C cation channel complex
GO:0045475 P locomotor rhythm
GO:0055080 P cation homeostasis
GO:0098655 P cation transmembrane transport
FPKM:1.33 TPM:0.69
374 A_BomoMSG_c10424_g1_i1
742bp
FPKM:16.79 TPM:8.74
375 A_BomoMSG_c10425_g1_i1
540bp
FPKM:3.65 TPM:1.90
376 A_BomoMSG_c10425_g1_i2
286bp
FPKM:0.00 TPM:0.00
377 A_BomoMSG_c10426_g1_i1
583bp
 OTU_protein_[Bombyx_mori]
FPKM:3.57 TPM:1.86
378 A_BomoMSG_c10426_g1_i2
266bp
 OTU_protein_[Bombyx_mori]
FPKM:1.14 TPM:0.59
379 A_BomoMSG_c10428_g1_i1
3121bp
 peroxisomal_biogenesis_factor_19_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0007031 P peroxisome organization
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0031526 C brush border membrane
FPKM:116.91 TPM:60.82
380 A_BomoMSG_c10429_g1_i1
529bp
 myelin_regulatory_factor_isoform_X3_[Bombyx_mori]
FPKM:4.11 TPM:2.14
381 A_BomoMSG_c10430_g1_i1
223bp
FPKM:3.19 TPM:1.66
382 A_BomoMSG_c10431_g1_i1
1133bp
 mucin-5AC_isoform_X2_[Bombyx_mori]
FPKM:1.83 TPM:0.95
383 A_BomoMSG_c10432_g1_i1
257bp
FPKM:2.23 TPM:1.16
384 A_BomoMSG_c10433_g1_i1
262bp
 phosphorylated_adapter_RNA_export_protein_isoform_X2_[Bombyx_mori]
FPKM:1.60 TPM:0.83
385 A_BomoMSG_c10436_g1_i1
2014bp
 PREDICTED:_proteasomal_ubiquitin_receptor_ADRM1_isoform_X1_[Papilio_machaon]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0010950 P positive regulation of endopeptidase activity
GO:0043248 P proteasome assembly
GO:0061133 F endopeptidase activator activity
FPKM:27.14 TPM:14.12
386 A_BomoMSG_c10436_g1_i2
2050bp
 PREDICTED:_proteasomal_ubiquitin_receptor_ADRM1_isoform_X1_[Papilio_machaon]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0010950 P positive regulation of endopeptidase activity
GO:0043248 P proteasome assembly
GO:0061133 F endopeptidase activator activity
FPKM:12.82 TPM:6.67
387 A_BomoMSG_c10437_g1_i1
434bp
 protein_crumbs_[Bombyx_mori]
GO:0001738 P morphogenesis of a polarized epithelium
GO:0001745 P compound eye morphogenesis
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0008104 P protein localization
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016028 C rhabdomere
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0030154 P cell differentiation
GO:0030507 F spectrin binding
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032880 P regulation of protein localization
GO:0033157 P regulation of intracellular protein transport
GO:0034332 P adherens junction organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035090 P maintenance of apical/basal cell polarity
GO:0035239 P tube morphogenesis
GO:0035330 P regulation of hippo signaling
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0042327 P positive regulation of phosphorylation
GO:0045186 P zonula adherens assembly
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045218 P zonula adherens maintenance
GO:0045494 P photoreceptor cell maintenance
GO:0045570 P regulation of imaginal disc growth
GO:0045746 P negative regulation of Notch signaling pathway
GO:0046621 P negative regulation of organ growth
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0048477 P oogenesis
GO:0050821 P protein stabilization
GO:0051642 P centrosome localization
GO:0061024 P membrane organization
GO:0061336 P cell morphogenesis involved in Malpighian tubule morphogenesis
GO:0061541 P rhabdomere morphogenesis
GO:0098813 P nuclear chromosome segregation
FPKM:2.95 TPM:1.54
388 A_BomoMSG_c10438_g1_i1
274bp
 uncharacterized_protein_LOC110384740_[Bombyx_mori]
FPKM:3.85 TPM:2.01
389 A_BomoMSG_c10439_g1_i1
334bp
FPKM:4.56 TPM:2.37
390 A_BomoMSG_c1043_g1_i1
354bp
FPKM:5.00 TPM:2.60
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