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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
391 A_BomoMSG_c10440_g1_i1
458bp
FPKM:2.72 TPM:1.42
392 A_BomoMSG_c10441_g1_i1
433bp
FPKM:2.75 TPM:1.43
393 A_BomoMSG_c10442_g1_i1
285bp
FPKM:0.89 TPM:0.46
394 A_BomoMSG_c10443_g1_i1
242bp
 F-box_only_protein_11_isoform_X2_[Bombyx_mori]
FPKM:1.88 TPM:0.98
395 A_BomoMSG_c10444_g1_i1
558bp
FPKM:2.06 TPM:1.07
396 A_BomoMSG_c10446_g1_i1
254bp
FPKM:0.00 TPM:0.00
397 A_BomoMSG_c10446_g1_i2
386bp
 afadin_isoform_X5_[Bombyx_mori]
FPKM:2.54 TPM:1.32
398 A_BomoMSG_c10447_g1_i1
316bp
FPKM:8.30 TPM:4.32
399 A_BomoMSG_c10448_g1_i1
210bp
FPKM:0.00 TPM:0.00
400 A_BomoMSG_c10449_g1_i1
348bp
 protein_VAC14_homolog_isoform_X1_[Bombyx_mori]
GO:0005768 C endosome
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0043550 P regulation of lipid kinase activity
GO:0070772 C PAS complex
FPKM:9.08 TPM:4.73
401 A_BomoMSG_c10450_g1_i1
370bp
FPKM:3.27 TPM:1.70
402 A_BomoMSG_c10450_g1_i2
241bp
FPKM:0.00 TPM:0.00
403 A_BomoMSG_c10451_g1_i1
318bp
 hypothetical_protein_[Acinetobacter_baumannii]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.71 TPM:0.37
404 A_BomoMSG_c10452_g1_i1
454bp
 C-Maf-inducing_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
FPKM:2.37 TPM:1.23
405 A_BomoMSG_c10453_g1_i1
581bp
 beta-1,3-galactosyltransferase_6_isoform_X4_[Bombyx_mori]
FPKM:2.08 TPM:1.08
406 A_BomoMSG_c10454_g1_i1
329bp
 uncharacterized_protein_LOC101741655_isoform_X2_[Bombyx_mori]
FPKM:2.34 TPM:1.22
407 A_BomoMSG_c10455_g1_i1
566bp
FPKM:2.16 TPM:1.12
408 A_BomoMSG_c10456_g1_i1
209bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
FPKM:4.81 TPM:2.50
409 A_BomoMSG_c10458_g1_i1
1033bp
FPKM:4.48 TPM:2.33
410 A_BomoMSG_c10459_g1_i1
585bp
 cryptochrome_1_isoform_X1_[Bombyx_mori]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0005641 C nuclear envelope lumen
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0009785 P blue light signaling pathway
GO:0009881 F photoreceptor activity
GO:0009882 F blue light photoreceptor activity
GO:0018298 P protein-chromophore linkage
GO:0042752 P regulation of circadian rhythm
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048471 C perinuclear region of cytoplasm
GO:0048511 P rhythmic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0050896 P response to stimulus
FPKM:2.34 TPM:1.22
411 A_BomoMSG_c10459_g2_i1
610bp
 cryptochrome_1_[Bombyx_mori]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0005641 C nuclear envelope lumen
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0009785 P blue light signaling pathway
GO:0009881 F photoreceptor activity
GO:0009882 F blue light photoreceptor activity
GO:0018298 P protein-chromophore linkage
GO:0042752 P regulation of circadian rhythm
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048471 C perinuclear region of cytoplasm
GO:0048511 P rhythmic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0050896 P response to stimulus
FPKM:2.60 TPM:1.35
412 A_BomoMSG_c1045_g1_i1
395bp
 huntingtin_[Bombyx_mori]
FPKM:1.71 TPM:0.89
413 A_BomoMSG_c10460_g1_i1
406bp
FPKM:4.21 TPM:2.19
414 A_BomoMSG_c10461_g1_i1
499bp
 protein_SREK1IP1-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
FPKM:25.75 TPM:13.40
415 A_BomoMSG_c10462_g1_i1
238bp
FPKM:6.04 TPM:3.14
416 A_BomoMSG_c10463_g1_i1
304bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA1109_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019915 P lipid storage
GO:0045444 P fat cell differentiation
GO:0051647 P nucleus localization
GO:0060612 P adipose tissue development
FPKM:4.67 TPM:2.43
417 A_BomoMSG_c10464_g1_i1
264bp
 prophenoloxidase_subunit_2_[Bombyx_mandarina]
GO:0004497 F monooxygenase activity
GO:0004503 F tyrosinase activity
GO:0005576 C extracellular region
GO:0006583 P melanin biosynthetic process from tyrosine
GO:0006952 P defense response
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0042438 P melanin biosynthetic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.57 TPM:0.82
418 A_BomoMSG_c10467_g1_i1
240bp
FPKM:2.63 TPM:1.37
419 A_BomoMSG_c10468_g1_i1
327bp
 transmembrane_protein_18_[Bombyx_mori]
FPKM:7.79 TPM:4.05
420 A_BomoMSG_c10470_g1_i1
288bp
FPKM:3.47 TPM:1.80
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