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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c10420_g1_i1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PDZ_and_LIM_domain_protein_Zasp_isoform_X1_[Helicoverpa_armigera]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:54.31 TPM:28.25
ORF EntryO_BomoMSG2252_3prime_partial:A_BomoMSG_c10420_g1_i1
Sequence
(Nucleotide)
TCTCAGCCGCACACTCGCGCGCCACAACTCGCTGCTTCCCCACGATCGAACGACCGACGC
CCGCGCCCGGTGTCGTATTACAGCTCTAAATTTATCTCGTGAGCGCGATCGCCAATTTGG
AAACGGTCGCGCGCCGTGTTTTGAACTGGTGATTGACAGTGCCGAGTGAGGAGTGATCCC
CCGAGCGACGTATTATCGCCTGCCGACATGGCACAGTTAATAACTGTGCGGCTTAACAAA
TCAGATCATCAACCCTTGGGCTTCAGGCTGCAAGGAGGCAAGGACTTCGGCACCCCACTA
GTCGTTCAAAAGGTGAATGGCGGCAGTGCGGCAGAGCGGGCTGGCTTGCAGGCCGGCGAC
GCTCTGATTCGCGTCAACAACACAGACGTGTTCACCCTGCGTCACCAAGACGCGCAGGAC
ACCATCCGCGCTGCTGGTGCTAATTTAGAACTAACCGTTCAACGCGGGGGAGGTACATGG
CGTCCATCAGTGACCCCGACCGGCAGCTTGCCGAGACCCGGCTCTCGTCCTCTGGGAGGT
ACTCCGACTCCGGTGACGAACACATCCTTGAAGGCGAACCCACAACCGTCGCGCAATTTC
GGCTCCGGGCACAACAATGTCGCTAAGCCTTTCGGTTATATGAACGGTAACGACACCGTC
AAGAGTGTCGTGAACAAACAATACAACACTCCTGTCAATATATACAGCGACAAGACAATT
GCGGAGACCCTGTCGGCCCAAACCGAAGTACTGGCTGGTGGAGTACTCGGAGTTAATTTC
AAGAAGAATGAGAAGACGTACGATGCTGAAAAAAGCGCTGTTTTCAAAGTACTTCAGGAG
GAGCAAAACGACCCTGAACCAGAAGTGTCGACTCCGACCACCGGCTCAGTGCCCCCGGTG
AGCGGACTCCGGCACGTGCAGGCGCCCGTCACGCGACCCGACGCGCCCGTCAACAACACG
GGCGGCCTGCCTCCCGGACAGAACATTTGCGAGGAGTGCGAACGATTAATTACGGGAGTG
TTTGTGCGCATCAAGGACAAGAATCTTCACGTGGAATGCTTCAAGTGTTCGACTTGCGGG
AGCTCTTTGAAGAATCAGGGCTATTACAACATAAACGGTAAACTGTACTGCGACATCCAC
GCCAAGCTGGTCGCACGTCAGAATCCACCAGCGCCGAACTTGGACCCTGTAACCGTGCCA
CCCGGTGGCCGAGTTCCTACCAACACATACTCTACGCCTTTGCCGCCACTGTCTACCAAT
AACTACAGCAATGGATCGTCTTCGCTGTTCAGCCCTTCAAGCAACCTGTCTGGCCCGAAG
CCGTTCGGGTCGTCGGTGGGGTCCGCGTACTCTCCGTCGCTGTCCCCCCGCTCGGCGCCG
CTGTCCCCCG
(1390 bp)

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