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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
331 A_BomoMSG_c10382_g1_i1
205bp
FPKM:1.02 TPM:0.53
332 A_BomoMSG_c10383_g1_i1
385bp
FPKM:1.53 TPM:0.80
333 A_BomoMSG_c10385_g1_i1
453bp
FPKM:6.33 TPM:3.29
334 A_BomoMSG_c10386_g1_i1
214bp
FPKM:9.87 TPM:5.13
335 A_BomoMSG_c10387_g1_i1
619bp
 CDK5_and_ABL1_enzyme_substrate_2_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
FPKM:0.00 TPM:0.00
336 A_BomoMSG_c10387_g1_i2
650bp
 CDK5_and_ABL1_enzyme_substrate_2_isoform_X2_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0007049 P cell cycle
GO:0008150 P biological_process
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
FPKM:1.92 TPM:1.00
337 A_BomoMSG_c10388_g1_i1
227bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.28 TPM:1.19
338 A_BomoMSG_c10389_g1_i1
417bp
FPKM:2.02 TPM:1.05
339 A_BomoMSG_c10390_g1_i1
401bp
FPKM:1.67 TPM:0.87
340 A_BomoMSG_c10391_g1_i1
268bp
FPKM:9.61 TPM:5.00
341 A_BomoMSG_c10392_g1_i1
1163bp
 lipoma_HMGIC_fusion_partner-like_3_protein_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:32.04 TPM:16.67
342 A_BomoMSG_c10393_g1_i1
344bp
FPKM:4.94 TPM:2.57
343 A_BomoMSG_c10394_g1_i1
483bp
 membrane-associated_guanylate_kinase,_WW_and_PDZ_domain-containing_protein_2_[Bombyx_mori]
FPKM:2.16 TPM:1.12
344 A_BomoMSG_c10395_g1_i1
772bp
 protein_timeless_homolog_isoform_X5_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0002009 P morphogenesis of an epithelium
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007623 P circadian rhythm
GO:0009582 P detection of abiotic stimulus
GO:0009628 P response to abiotic stimulus
GO:0015630 C microtubule cytoskeleton
GO:0030324 P lung development
GO:0042127 P regulation of cell population proliferation
GO:0042752 P regulation of circadian rhythm
GO:0042803 F protein homodimerization activity
GO:0044770 P cell cycle phase transition
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046982 F protein heterodimerization activity
GO:0048511 P rhythmic process
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0051301 P cell division
FPKM:3.76 TPM:1.95
345 A_BomoMSG_c10396_g1_i1
356bp
FPKM:2.33 TPM:1.21
346 A_BomoMSG_c10397_g1_i1
493bp
FPKM:4.72 TPM:2.45
347 A_BomoMSG_c10398_g1_i1
452bp
 LOW_QUALITY_PROTEIN:_cytokine_receptor_[Bombyx_mori]
FPKM:2.58 TPM:1.34
348 A_BomoMSG_c10399_g1_i1
308bp
FPKM:3.41 TPM:1.78
349 A_BomoMSG_c1039_g1_i1
1102bp
 RNA_binding_motif_protein_Y14_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000226 P microtubule cytoskeleton organization
GO:0000335 P negative regulation of transposition, DNA-mediated
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007294 P germarium-derived oocyte fate determination
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007314 P oocyte anterior/posterior axis specification
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0008380 P RNA splicing
GO:0035145 C exon-exon junction complex
GO:0045451 P pole plasm oskar mRNA localization
GO:0046595 P establishment of pole plasm mRNA localization
GO:0051028 P mRNA transport
GO:0071013 C catalytic step 2 spliceosome
FPKM:52.27 TPM:27.19
350 A_BomoMSG_c1039_g1_i2
980bp
 RNA_binding_motif_protein_Y14_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000226 P microtubule cytoskeleton organization
GO:0000335 P negative regulation of transposition, DNA-mediated
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007294 P germarium-derived oocyte fate determination
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007314 P oocyte anterior/posterior axis specification
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0008380 P RNA splicing
GO:0035145 C exon-exon junction complex
GO:0045451 P pole plasm oskar mRNA localization
GO:0046595 P establishment of pole plasm mRNA localization
GO:0051028 P mRNA transport
GO:0071013 C catalytic step 2 spliceosome
FPKM:0.00 TPM:0.00
351 A_BomoMSG_c10400_g1_i1
205bp
 uncharacterized_protein_LOC101737183_[Bombyx_mori]
FPKM:5.11 TPM:2.66
352 A_BomoMSG_c10401_g1_i1
254bp
FPKM:5.72 TPM:2.97
353 A_BomoMSG_c10402_g1_i1
532bp
FPKM:2.82 TPM:1.47
354 A_BomoMSG_c10403_g1_i1
1834bp
 fatty-acid_amide_hydrolase_2-A_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
FPKM:23.46 TPM:12.21
355 A_BomoMSG_c10404_g1_i1
700bp
FPKM:6.21 TPM:3.23
356 A_BomoMSG_c10405_g1_i1
3018bp
 97_kDa_heat_shock_protein_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006457 P protein folding
GO:0006986 P response to unfolded protein
FPKM:45.48 TPM:23.66
357 A_BomoMSG_c10406_g1_i1
2124bp
 putative_ecdysone_oxidase,_partial_[Operophtera_brumata]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:386.39 TPM:201.01
358 A_BomoMSG_c10407_g1_i1
399bp
 PREDICTED:_uncharacterized_protein_LOC105392159_isoform_X2_[Plutella_xylostella]
FPKM:3.37 TPM:1.75
359 A_BomoMSG_c10409_g1_i1
1263bp
 acetyl-CoA_carboxylase_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003989 F acetyl-CoA carboxylase activity
GO:0004075 F biotin carboxylase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005829 C cytosol
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006768 P biotin metabolic process
GO:0006853 P carnitine shuttle
GO:0008152 P metabolic process
GO:0010629 P negative regulation of gene expression
GO:0010884 P positive regulation of lipid storage
GO:0010906 P regulation of glucose metabolic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0031325 P positive regulation of cellular metabolic process
GO:0031667 P response to nutrient levels
GO:0031999 P negative regulation of fatty acid beta-oxidation
GO:0043086 P negative regulation of catalytic activity
GO:0046322 P negative regulation of fatty acid oxidation
GO:0046872 F metal ion binding
GO:0050995 P negative regulation of lipid catabolic process
GO:0051289 P protein homotetramerization
GO:0060421 P positive regulation of heart growth
GO:0097009 P energy homeostasis
GO:2001295 P malonyl-CoA biosynthetic process
FPKM:2.21 TPM:1.15
360 A_BomoMSG_c10410_g1_i1
363bp
 translation_initiation_factor_eIF-2B_subunit_epsilon_isoform_X2_[Bombyx_mori]
FPKM:5.63 TPM:2.93
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