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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
271 A_BomoMSG_c10321_g1_i1
322bp
 serine/threonine-protein_kinase_D1_[Bombyx_mori]
FPKM:1.39 TPM:0.73
272 A_BomoMSG_c10321_g1_i2
214bp
FPKM:1.79 TPM:0.93
273 A_BomoMSG_c10323_g1_i1
314bp
FPKM:4.02 TPM:2.09
274 A_BomoMSG_c10324_g1_i1
1722bp
 3-ketodihydrosphingosine_reductase_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006666 P 3-keto-sphinganine metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0030148 P sphingolipid biosynthetic process
GO:0047560 F 3-dehydrosphinganine reductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:23.50 TPM:12.22
275 A_BomoMSG_c10325_g1_i1
998bp
FPKM:27.61 TPM:14.36
276 A_BomoMSG_c10326_g1_i1
593bp
FPKM:2.16 TPM:1.13
277 A_BomoMSG_c10327_g1_i1
209bp
FPKM:1.93 TPM:1.00
278 A_BomoMSG_c10328_g1_i1
1350bp
 notchless_protein_homolog_1_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0007219 P Notch signaling pathway
FPKM:17.01 TPM:8.85
279 A_BomoMSG_c10329_g1_i1
667bp
FPKM:1.51 TPM:0.78
280 A_BomoMSG_c10330_g1_i1
415bp
FPKM:2.04 TPM:1.06
281 A_BomoMSG_c10334_g1_i1
587bp
FPKM:2.74 TPM:1.43
282 A_BomoMSG_c10335_g1_i1
251bp
 kinesin-like_protein_KIN-7L_isoform_X2_[Bombyx_mori]
FPKM:2.94 TPM:1.53
283 A_BomoMSG_c10336_g1_i1
952bp
 non-canonical_poly(A)_RNA_polymerase_protein_Trf4-1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0071044 P histone mRNA catabolic process
GO:0071897 P DNA biosynthetic process
FPKM:2.31 TPM:1.20
284 A_BomoMSG_c10337_g1_i1
463bp
FPKM:0.77 TPM:0.40
285 A_BomoMSG_c10338_g1_i1
239bp
 PREDICTED:_probable_DNA_double-strand_break_repair_Rad50_ATPase_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0042995 C cell projection
FPKM:2.65 TPM:1.38
286 A_BomoMSG_c10339_g1_i1
291bp
FPKM:6.79 TPM:3.53
287 A_BomoMSG_c10340_g1_i1
537bp
 uncharacterized_protein_LOC692883_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:17.65 TPM:9.18
288 A_BomoMSG_c10340_g1_i2
411bp
 uncharacterized_protein_LOC692883_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.44 TPM:1.79
289 A_BomoMSG_c10341_g1_i1
640bp
 ankyrin_repeat_and_LEM_domain-containing_protein_1_[Bombyx_mori]
FPKM:1.47 TPM:0.76
290 A_BomoMSG_c10341_g1_i2
492bp
 ankyrin_repeat_and_LEM_domain-containing_protein_1_[Bombyx_mori]
FPKM:0.00 TPM:0.00
291 A_BomoMSG_c10343_g1_i1
228bp
 hypothetical_protein_[Escherichia_coli]
FPKM:9.01 TPM:4.68
292 A_BomoMSG_c10344_g1_i1
548bp
 PREDICTED:_uncharacterized_protein_LOC105396011_[Plutella_xylostella]
FPKM:2.11 TPM:1.10
293 A_BomoMSG_c10344_g1_i2
539bp
 PREDICTED:_uncharacterized_protein_LOC105396011_[Plutella_xylostella]
FPKM:0.00 TPM:0.00
294 A_BomoMSG_c10345_g1_i1
504bp
 pyruvate_dehydrogenase_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004740 F pyruvate dehydrogenase (acetyl-transferring) kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005975 P carbohydrate metabolic process
GO:0006006 P glucose metabolic process
GO:0006090 P pyruvate metabolic process
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
FPKM:3.05 TPM:1.58
295 A_BomoMSG_c10345_g2_i1
327bp
 pyruvate_dehydrogenase_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004740 F pyruvate dehydrogenase (acetyl-transferring) kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005975 P carbohydrate metabolic process
GO:0006006 P glucose metabolic process
GO:0006090 P pyruvate metabolic process
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
FPKM:4.74 TPM:2.47
296 A_BomoMSG_c10347_g1_i1
290bp
FPKM:2.99 TPM:1.56
297 A_BomoMSG_c10348_g1_i1
369bp
 uncharacterized_protein_LOC110385226_isoform_X1_[Bombyx_mori]
FPKM:1.63 TPM:0.85
298 A_BomoMSG_c10348_g1_i2
253bp
 uncharacterized_protein_LOC110385226_isoform_X1_[Bombyx_mori]
FPKM:1.75 TPM:0.91
299 A_BomoMSG_c10349_g1_i1
207bp
 putative_FLYWCH-type_zinc_finger-containing_protein_1_[Operophtera_brumata]
FPKM:0.00 TPM:0.00
300 A_BomoMSG_c10349_g1_i2
655bp
 protein_tramtrack,_beta_isoform-like_isoform_X13_[Helicoverpa_armigera]
FPKM:4.27 TPM:2.22
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