SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c10336_g1_i1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		non-canonical_poly(A)_RNA_polymerase_protein_Trf4-1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0071044 P histone mRNA catabolic process
GO:0071897 P DNA biosynthetic process
Transcript
Level		FPKM:2.31 TPM:1.20
ORF EntryO_BomoMSG2200_complete:A_BomoMSG_c10336_g1_i1
Sequence
(Nucleotide)
CCTAATTATGCGTACAAGCCGGGAGTGTTGGGGCTCCACGAAGAGATCGATCACTTCTAC
ATGTACATGTCGCCGACGGAGACGGAGCACCTGGTCCGCTCGACCGTGGTGAACAGAATC
CGCGCCGCCATCCTGTCGCTCTGGCCCCAGGCCCGGGTCGAGGTGTTCGGTTCATTCCGT
ACTGGACTGTACCTGCCGACCAGCGATATAGACCTAGTCGTTATTGGTCAGTGGGAGAAG
CTCCCGCTCTGGACTCTGGAGCGGGAGCTCGTGGTGCAGGATATTGCAGAGAAGGAGAGC
ATCAAGGTGCTCGAGAAGGCCACCGTGCCCATCGTCAAGATGACCGACAAATATTCTGAT
GTTAAAGTGGACATATCTTTCAACATGAGCAGCGGCGTGAAGAGCGCCGAACTTATCAAA
CATTTCAAGGAGAAATACCCAGTCCTTTCTCGACTGGTGATGGTCCTGAAGCAGTTTCTC
CTGCAGCGAGACCTGAACGAAGTGTTCACTGGAGGCATCTCCTCGTACTCCCTGATCCTC
ATGTGCATCAGCTTCCTGCAACTGCACCCTCGGCCCGAGCGCCTGAGGCAGCCCAACAAC
CTGGGCGTCTTGCTCATCGAGTTCTTCGAACTCTACGGCAGGAAATTTAACTACGTGAAA
ACCGCCATCAGAGTCAAGAACGGCGGCTCCTACGTCTCCAAGGACGAGATACAGAAGGAG
ATGAACGACGGTCACCGTCCGTCGCTGCTGTGCATCGAGGACCCGCTGACGCCGGGCAAC
GACATCGGCCGCTCCTCCTACGGCGCCCTGCAAGTCAAGCAGGCCTTCGACTACGGGTAC
ATCGTGCTGCAGCAGGCGGCGGCGGCGGGCGCGCCGGGCGTGCTGGGCCGCGTGCTGCGC
GTCACCGACCACGTGCTGCAGTACCGCCGCTGGGTGCGCGACACCTTCCACC
(952 bp)

- SilkBase 1999-2023 -