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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
241 A_BomoMSG_c10282_g1_i1
447bp
FPKM:3.03 TPM:1.57
242 A_BomoMSG_c10283_g1_i1
606bp
 coiled-coil_domain-containing_protein_115_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0030137 C COPI-coated vesicle
FPKM:32.97 TPM:17.15
243 A_BomoMSG_c10284_g1_i1
399bp
FPKM:1.93 TPM:1.00
244 A_BomoMSG_c10285_g1_i1
375bp
FPKM:4.54 TPM:2.36
245 A_BomoMSG_c10286_g1_i1
223bp
FPKM:3.19 TPM:1.66
246 A_BomoMSG_c10288_g1_i1
566bp
 uncharacterized_protein_LOC101736412_[Bombyx_mori]
FPKM:3.02 TPM:1.57
247 A_BomoMSG_c1028_g1_i1
377bp
 protein_kibra_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0035330 P regulation of hippo signaling
FPKM:2.90 TPM:1.51
248 A_BomoMSG_c10290_g1_i1
4119bp
 coatomer_protein_complex_subunit_alpha_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005179 F hormone activity
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030126 C COPI vesicle coat
GO:0030663 C COPI-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
FPKM:11.49 TPM:5.98
249 A_BomoMSG_c10290_g1_i2
4104bp
 coatomer_protein_complex_subunit_alpha_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005179 F hormone activity
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030126 C COPI vesicle coat
GO:0030663 C COPI-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
FPKM:46.02 TPM:23.94
250 A_BomoMSG_c10292_g1_i1
255bp
FPKM:3.40 TPM:1.77
251 A_BomoMSG_c10294_g1_i1
489bp
FPKM:1.77 TPM:0.92
252 A_BomoMSG_c10295_g1_i1
399bp
FPKM:2.89 TPM:1.50
253 A_BomoMSG_c10296_g1_i1
262bp
FPKM:1.60 TPM:0.83
254 A_BomoMSG_c10297_g1_i1
626bp
FPKM:20.51 TPM:10.67
255 A_BomoMSG_c102_g1_i1
313bp
FPKM:2.21 TPM:1.15
256 A_BomoMSG_c10300_g1_i1
286bp
FPKM:4.40 TPM:2.29
257 A_BomoMSG_c10302_g1_i1
259bp
FPKM:6.56 TPM:3.41
258 A_BomoMSG_c10304_g1_i1
2511bp
 chloride_intracellular_channel_isoform_X1_[Bombyx_mori]
GO:0002064 P epithelial cell development
GO:0004364 F glutathione transferase activity
GO:0005244 F voltage-gated ion channel activity
GO:0005254 F chloride channel activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005887 C integral component of plasma membrane
GO:0006749 P glutathione metabolic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0034707 C chloride channel complex
GO:0034765 P regulation of ion transmembrane transport
GO:0035150 P regulation of tube size
GO:0043296 C apical junction complex
GO:1902476 P chloride transmembrane transport
FPKM:116.21 TPM:60.45
259 A_BomoMSG_c10306_g1_i1
220bp
FPKM:4.14 TPM:2.15
260 A_BomoMSG_c10307_g1_i1
640bp
 phospholipase_A1_[Bombyx_mori]
GO:0004620 F phospholipase activity
GO:0004806 F triglyceride lipase activity
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006629 P lipid metabolic process
GO:0009395 P phospholipid catabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0019376 P galactolipid catabolic process
GO:0046872 F metal ion binding
GO:0047372 F acylglycerol lipase activity
GO:0047714 F galactolipase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:2.20 TPM:1.14
261 A_BomoMSG_c10308_g1_i1
495bp
 gastrula_zinc_finger_protein_XlCGF57.1_[Bombyx_mori]
FPKM:2.78 TPM:1.45
262 A_BomoMSG_c1030_g1_i1
227bp
 pecanex-like_protein_1_[Bombyx_mori]
FPKM:6.08 TPM:3.16
263 A_BomoMSG_c10310_g1_i1
217bp
 protein_ANTAGONIST_OF_LIKE_HETEROCHROMATIN_PROTEIN_1,_partial_[Bombyx_mori]
FPKM:1.72 TPM:0.90
264 A_BomoMSG_c10311_g1_i1
2529bp
 nucleolin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
GO:0044822 F RNA binding
FPKM:76.75 TPM:39.93
265 A_BomoMSG_c10312_g1_i1
307bp
 apolipophorins_isoform_X2_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016055 P Wnt signaling pathway
FPKM:1.53 TPM:0.79
266 A_BomoMSG_c10313_g1_i1
237bp
FPKM:2.03 TPM:1.06
267 A_BomoMSG_c10314_g1_i1
227bp
FPKM:3.80 TPM:1.98
268 A_BomoMSG_c10317_g1_i1
444bp
FPKM:2.65 TPM:1.38
269 A_BomoMSG_c10318_g1_i1
348bp
 catenin_delta-2_isoform_X4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005912 C adherens junction
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0014069 C postsynaptic density
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043204 C perikaryon
FPKM:0.91 TPM:0.47
270 A_BomoMSG_c10319_g1_i1
269bp
 uncharacterized_protein_LOC105841829_[Bombyx_mori]
FPKM:3.51 TPM:1.83
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