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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1111 A_BomoMSG_c11221_g1_i1
704bp
FPKM:5.73 TPM:2.98
1112 A_BomoMSG_c11222_g1_i1
358bp
FPKM:5.48 TPM:2.85
1113 A_BomoMSG_c11223_g1_i1
1428bp
 6-phosphogluconolactonase_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006098 P pentose-phosphate shunt
GO:0009051 P pentose-phosphate shunt, oxidative branch
GO:0016787 F hydrolase activity
GO:0017057 F 6-phosphogluconolactonase activity
GO:0048029 F monosaccharide binding
FPKM:28.21 TPM:14.68
1114 A_BomoMSG_c11224_g1_i1
272bp
FPKM:2.94 TPM:1.53
1115 A_BomoMSG_c11225_g1_i1
631bp
 telomerase_reverse_transcriptase_[Bombyx_mori]
FPKM:3.98 TPM:2.07
1116 A_BomoMSG_c11228_g1_i1
223bp
 intersectin-1_isoform_X4_[Bombyx_mori]
FPKM:0.80 TPM:0.41
1117 A_BomoMSG_c11229_g1_i1
301bp
FPKM:4.36 TPM:2.27
1118 A_BomoMSG_c1122_g1_i1
285bp
 patronin_isoform_X15_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007049 P cell cycle
GO:0008017 F microtubule binding
GO:0030496 C midbody
GO:0030507 F spectrin binding
GO:0031175 P neuron projection development
GO:0051011 F microtubule minus-end binding
GO:0051013 P microtubule severing
FPKM:2.22 TPM:1.15
1119 A_BomoMSG_c11230_g1_i1
203bp
 formin-binding_protein_1-like_isoform_X1_[Bombyx_mori]
FPKM:9.49 TPM:4.93
1120 A_BomoMSG_c11232_g1_i1
865bp
FPKM:7.42 TPM:3.86
1121 A_BomoMSG_c11233_g1_i1
204bp
 uncharacterized_protein_LOC110384828_[Bombyx_mori]
FPKM:2.08 TPM:1.08
1122 A_BomoMSG_c11234_g1_i1
482bp
 flavin-dependent_monooxygenase_FMO2_isoform_X1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0004499 F N,N-dimethylaniline monooxygenase activity
GO:0005576 C extracellular region
GO:0009820 P alkaloid metabolic process
GO:0016491 F oxidoreductase activity
GO:0033784 F senecionine N-oxygenase activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0051289 P protein homotetramerization
GO:0055114 P obsolete oxidation-reduction process
FPKM:4.15 TPM:2.16
1123 A_BomoMSG_c11235_g1_i1
1491bp
 uncharacterized_protein_LOC101736728_[Bombyx_mori]
FPKM:68.09 TPM:35.42
1124 A_BomoMSG_c11235_g1_i2
881bp
 uncharacterized_protein_LOC101736728_[Bombyx_mori]
FPKM:22.55 TPM:11.73
1125 A_BomoMSG_c11240_g1_i1
507bp
FPKM:5.54 TPM:2.88
1126 A_BomoMSG_c11241_g1_i1
1120bp
 uncharacterized_protein_LOC101741342_[Bombyx_mori]
FPKM:8.19 TPM:4.26
1127 A_BomoMSG_c11241_g1_i2
1086bp
 uncharacterized_protein_LOC101741342_[Bombyx_mori]
FPKM:40.26 TPM:20.94
1128 A_BomoMSG_c11242_g1_i1
328bp
 elastase-1_[Bombyx_mori]
FPKM:2.69 TPM:1.40
1129 A_BomoMSG_c11243_g1_i1
260bp
FPKM:15.71 TPM:8.17
1130 A_BomoMSG_c11244_g1_i1
300bp
FPKM:2.00 TPM:1.04
1131 A_BomoMSG_c11245_g1_i1
210bp
FPKM:12.33 TPM:6.42
1132 A_BomoMSG_c11246_g1_i1
518bp
FPKM:5.70 TPM:2.96
1133 A_BomoMSG_c11247_g1_i1
323bp
FPKM:3.46 TPM:1.80
1134 A_BomoMSG_c11249_g1_i1
713bp
FPKM:2.66 TPM:1.38
1135 A_BomoMSG_c1124_g1_i1
265bp
FPKM:1.56 TPM:0.81
1136 A_BomoMSG_c11250_g1_i1
920bp
FPKM:2.26 TPM:1.17
1137 A_BomoMSG_c11251_g1_i1
415bp
 PREDICTED:_transmembrane_and_TPR_repeat-containing_protein_CG4050_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.96 TPM:0.50
1138 A_BomoMSG_c11251_g1_i2
569bp
 transmembrane_and_TPR_repeat-containing_protein_CG4050_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.11 TPM:0.58
1139 A_BomoMSG_c11253_g1_i1
781bp
 PREDICTED:_RING-box_protein_1A_isoform_X2_[Plutella_xylostella]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0016322 P neuron remodeling
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0019788 F NEDD8 transferase activity
GO:0019915 P lipid storage
GO:0022008 P neurogenesis
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0031467 C Cul7-RING ubiquitin ligase complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043224 C nuclear SCF ubiquitin ligase complex
GO:0045116 P protein neddylation
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:0097602 F cullin family protein binding
FPKM:59.79 TPM:31.11
1140 A_BomoMSG_c11254_g1_i1
358bp
 zinc_finger_protein_567_[Bombyx_mori]
FPKM:2.88 TPM:1.50
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