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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c11253_g1_i1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_RING-box_protein_1A_isoform_X2_[Plutella_xylostella]
Ontology
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0016322 P neuron remodeling
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0019788 F NEDD8 transferase activity
GO:0019915 P lipid storage
GO:0022008 P neurogenesis
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0031467 C Cul7-RING ubiquitin ligase complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043224 C nuclear SCF ubiquitin ligase complex
GO:0045116 P protein neddylation
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:0097602 F cullin family protein binding
Transcript
Level		FPKM:59.79 TPM:31.11
ORF EntryO_BomoMSG2522_complete:A_BomoMSG_c11253_g1_i1
Sequence
(Nucleotide)
AAAAACATATCAACATGAAGTTTTTAAAATTTCGATTCAGCTGTCAAAAACATAATACAC
AACCTAACAACTCTTGGTTATTTTTTAATAAAACGGGGTAGTTTAATTTGAAAATGGCTT
CTGTGATGGATGTTGATGAAGAAGAAGTTGAAATGGCTTCGTCTAGTAGTGGCAAAGGAG
ATAAAAAAAGATTCGAAGTAAAAAAGTGGAATGCAGTAGCACTCTGGGCTTGGGATATTG
TTGTCGACAACTGTGCTATTTGCCGAAATCACATAATGGATCTGTGTATCGAATGCCAAG
CAAATCAAGCCTCAGCCACTAGTGAAGAATGCACAGTTGCTTGGGGTGTTTGTAATCATG
CATTCCATTTCCACTGTATTTCCCGTTGGTTGAAGACTCGACAAGTTTGTCCACTAGACA
ATAGAGAATGGGAGTTCCAAAAGTATGGTCATTAAATGTCATTTAGAAGAGCTGCATCCT
GCACAGGAGTTTGACATCTTCTGAACATAGGGAATTAACATGTCAATATCTATTAAGTTT
GTAATAATAAAATAACTCTTACAAAATTCTGTATGTGAATTTTAATTGAAAATTCGTTGA
AAATCTGTTGTTCATAATAATCTGGCATAAAAATAGTAAACTCCTATGATTATAAATAAA
AATTTTACTTAATGGAAGCAAGTCACTCCAAGATATTCTTGCAAGCACGTTATAAATTAC
AAGGTAAATAAAAATTACATAAATTACTCAATAAAGTATAAAAAGAATTTTCAGATCGGA
A
(781 bp)

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