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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1081 A_BomoMSG_c11183_g1_i1
361bp
 uncharacterized_protein_LOC105841547_[Bombyx_mori]
FPKM:2.27 TPM:1.18
1082 A_BomoMSG_c11184_g1_i1
526bp
 uncharacterized_protein_LOC101742255_[Bombyx_mori]
FPKM:2.71 TPM:1.41
1083 A_BomoMSG_c11185_g1_i1
399bp
 PREDICTED:_uncharacterized_protein_LOC108361514_[Rhagoletis_zephyria]
FPKM:1.93 TPM:1.00
1084 A_BomoMSG_c11186_g1_i1
635bp
 mitochondrial_import_inner_membrane_translocase_subunit_Tim29_[Bombyx_mori]
FPKM:25.94 TPM:13.49
1085 A_BomoMSG_c11189_g1_i1
298bp
FPKM:2.43 TPM:1.26
1086 A_BomoMSG_c11190_g1_i1
246bp
FPKM:2.47 TPM:1.28
1087 A_BomoMSG_c11191_g1_i1
353bp
FPKM:24.21 TPM:12.60
1088 A_BomoMSG_c11193_g1_i1
226bp
FPKM:6.15 TPM:3.20
1089 A_BomoMSG_c11194_g1_i1
655bp
FPKM:2.25 TPM:1.17
1090 A_BomoMSG_c11196_g1_i1
636bp
 PREDICTED:_uncharacterized_protein_LOC103578666_[Microplitis_demolitor]
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
FPKM:2.96 TPM:1.54
1091 A_BomoMSG_c11197_g1_i1
659bp
 ribonuclease_3_[Bombyx_mori]
GO:0001530 F lipopolysaccharide binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0004525 F ribonuclease III activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006396 P RNA processing
GO:0010468 P regulation of gene expression
GO:0010586 P miRNA metabolic process
GO:0010628 P positive regulation of gene expression
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0030422 P production of siRNA involved in RNA interference
GO:0031053 P primary miRNA processing
GO:0031054 P pre-miRNA processing
GO:0042254 P ribosome biogenesis
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0050829 P defense response to Gram-negative bacterium
GO:0050830 P defense response to Gram-positive bacterium
GO:0070877 C microprocessor complex
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:2000628 P regulation of miRNA metabolic process
FPKM:3.41 TPM:1.78
1092 A_BomoMSG_c11198_g1_i1
259bp
FPKM:7.65 TPM:3.98
1093 A_BomoMSG_c11199_g1_i1
470bp
 probable_phospholipid-transporting_ATPase_IM_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007030 P Golgi organization
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
FPKM:1.69 TPM:0.88
1094 A_BomoMSG_c1119_g1_i1
437bp
FPKM:1.25 TPM:0.65
1095 A_BomoMSG_c111_g1_i1
568bp
 uncharacterized_protein_LOC101739782_[Bombyx_mori]
FPKM:63.91 TPM:33.25
1096 A_BomoMSG_c11200_g1_i1
293bp
 elongation_factor-like_GTPase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0006412 P translation
GO:0008152 P metabolic process
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0043022 F ribosome binding
FPKM:2.51 TPM:1.31
1097 A_BomoMSG_c11201_g1_i1
282bp
FPKM:5.89 TPM:3.06
1098 A_BomoMSG_c11202_g1_i1
227bp
FPKM:0.76 TPM:0.40
1099 A_BomoMSG_c11203_g1_i1
378bp
 glucose_dehydrogenase_[FAD,_quinone]_[Bombyx_mori]
GO:0004344 F glucose dehydrogenase activity
GO:0005576 C extracellular region
GO:0006006 P glucose metabolic process
GO:0008364 P pupal chitin-based cuticle development
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0019233 P sensory perception of pain
GO:0042335 P cuticle development
GO:0046693 P sperm storage
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.89 TPM:1.50
1100 A_BomoMSG_c11205_g1_i1
403bp
 trypsin,_alkaline_A_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
FPKM:6.87 TPM:3.57
1101 A_BomoMSG_c11207_g1_i1
357bp
FPKM:7.82 TPM:4.07
1102 A_BomoMSG_c11208_g1_i1
286bp
FPKM:4.84 TPM:2.52
1103 A_BomoMSG_c11209_g1_i1
352bp
 ribosomal_protein_L11_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000027 P ribosomal large subunit assembly
GO:0000228 C nuclear chromosome
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005703 C polytene chromosome puff
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0007052 P mitotic spindle organization
GO:0019233 P sensory perception of pain
GO:0019843 F rRNA binding
GO:0022625 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0051298 P centrosome duplication
FPKM:2.67 TPM:1.39
1104 A_BomoMSG_c11211_g1_i1
295bp
FPKM:7.02 TPM:3.65
1105 A_BomoMSG_c11212_g1_i1
392bp
FPKM:2.97 TPM:1.55
1106 A_BomoMSG_c11214_g1_i1
436bp
FPKM:2.10 TPM:1.09
1107 A_BomoMSG_c11215_g1_i1
356bp
FPKM:2.33 TPM:1.21
1108 A_BomoMSG_c11218_g1_i1
1339bp
 ubiquitin_carboxyl-terminal_hydrolase_46_isoform_X1_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007610 P behavior
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0036459 F thiol-dependent deubiquitinase
FPKM:25.53 TPM:13.28
1109 A_BomoMSG_c11219_g1_i1
443bp
FPKM:12.07 TPM:6.28
1110 A_BomoMSG_c11220_g1_i1
435bp
FPKM:2.94 TPM:1.53
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