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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2221 A_BomoASG_c12970_g1_i1
277bp
FPKM:4.28 TPM:3.28
2222 A_BomoASG_c12971_g1_i1
348bp
 adhesive_plaque_matrix_protein_isoform_X2_[Bombyx_mori]
FPKM:2.43 TPM:1.86
2223 A_BomoASG_c12972_g1_i1
5619bp
 dentin_sialophosphoprotein_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006935 P chemotaxis
GO:0006955 P immune response
GO:0016032 P viral process
GO:0030595 P leukocyte chemotaxis
GO:0050930 P induction of positive chemotaxis
FPKM:89.27 TPM:68.48
2224 A_BomoASG_c12973_g1_i1
240bp
FPKM:2.00 TPM:1.54
2225 A_BomoASG_c12974_g1_i1
1019bp
FPKM:4.78 TPM:3.66
2226 A_BomoASG_c12975_g1_i1
278bp
 putative_RNA-directed_DNA_polymerase_from_transposon_BS_[Papilio_xuthus]
FPKM:2.83 TPM:2.17
2227 A_BomoASG_c12976_g1_i1
318bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.43 TPM:1.10
2228 A_BomoASG_c12977_g1_i1
688bp
FPKM:19.67 TPM:15.09
2229 A_BomoASG_c12978_g1_i1
372bp
 hypothetical_protein_MYCFIDRAFT_172852_[Pseudocercospora_fijiensis_CIRAD86]
FPKM:1.75 TPM:1.34
2230 A_BomoASG_c12978_g1_i2
209bp
FPKM:2.49 TPM:1.91
2231 A_BomoASG_c12979_g1_i1
297bp
FPKM:2.32 TPM:1.78
2232 A_BomoASG_c12979_g1_i2
249bp
FPKM:0.82 TPM:0.63
2233 A_BomoASG_c1297_g1_i1
291bp
FPKM:1.28 TPM:0.98
2234 A_BomoASG_c12980_g1_i1
2740bp
 uncharacterized_protein_LOC101735428_isoform_X2_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
FPKM:111.92 TPM:85.85
2235 A_BomoASG_c12981_g1_i1
346bp
 uncharacterized_protein_LOC101738890_[Bombyx_mori]
FPKM:2.15 TPM:1.65
2236 A_BomoASG_c12982_g1_i1
1382bp
FPKM:45.41 TPM:34.83
2237 A_BomoASG_c12984_g1_i1
1241bp
 charged_multivesicular_body_protein_2b_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007034 P vacuolar transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031902 C late endosome membrane
FPKM:41.22 TPM:31.62
2238 A_BomoASG_c12984_g1_i2
278bp
 charged_multivesicular_body_protein_2b_[Bombyx_mori]
FPKM:4.67 TPM:3.59
2239 A_BomoASG_c12984_g1_i3
998bp
 charged_multivesicular_body_protein_2b_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007034 P vacuolar transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031902 C late endosome membrane
FPKM:12.67 TPM:9.72
2240 A_BomoASG_c12985_g1_i1
1272bp
 ubiquitin-conjugating_enzyme_E2_J1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007286 P spermatid development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0042534 P regulation of tumor necrosis factor production
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:1904153 P negative regulation of retrograde protein transport, ER to cytosol
FPKM:42.40 TPM:32.53
2241 A_BomoASG_c12987_g1_i1
545bp
FPKM:4.83 TPM:3.70
2242 A_BomoASG_c12988_g1_i1
254bp
FPKM:1.74 TPM:1.33
2243 A_BomoASG_c12989_g1_i1
353bp
 PREDICTED:_uncharacterized_protein_LOC106720507_[Papilio_machaon]
FPKM:1.48 TPM:1.13
2244 A_BomoASG_c12990_g1_i1
286bp
FPKM:6.21 TPM:4.76
2245 A_BomoASG_c12991_g1_i1
228bp
FPKM:1.53 TPM:1.17
2246 A_BomoASG_c12992_g1_i1
2019bp
 choline-phosphate_cytidylyltransferase_B_isoform_X1_[Bombyx_mori]
GO:0001541 P ovarian follicle development
GO:0003824 F catalytic activity
GO:0004105 F choline-phosphate cytidylyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0006629 P lipid metabolic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0007283 P spermatogenesis
GO:0008654 P phospholipid biosynthetic process
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:53.78 TPM:41.25
2247 A_BomoASG_c12992_g1_i2
2076bp
 choline-phosphate_cytidylyltransferase_B_isoform_X2_[Bombyx_mori]
GO:0001541 P ovarian follicle development
GO:0003824 F catalytic activity
GO:0004105 F choline-phosphate cytidylyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0006629 P lipid metabolic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0007283 P spermatogenesis
GO:0008654 P phospholipid biosynthetic process
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:60.22 TPM:46.19
2248 A_BomoASG_c12993_g1_i1
2064bp
 triokinase/FMN_cyclase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004371 F glycerone kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006071 P glycerol metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016829 F lyase activity
GO:0034012 F FAD-AMP lyase (cyclizing) activity
GO:0039534 P negative regulation of MDA-5 signaling pathway
GO:0044262 P cellular carbohydrate metabolic process
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0050354 F triokinase activity
GO:0061624 P fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate
GO:0070062 C extracellular exosome
FPKM:132.23 TPM:101.43
2249 A_BomoASG_c12996_g1_i1
218bp
FPKM:0.60 TPM:0.46
2250 A_BomoASG_c12996_g1_i2
491bp
FPKM:2.15 TPM:1.65
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