SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c12980_g1_i1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101735428_isoform_X2_[Bombyx_mori]
Ontology
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
Transcript
Level		FPKM:111.92 TPM:85.85
ORF EntryO_BomoASG2269_complete:A_BomoASG_c12980_g1_i1
Sequence
(Nucleotide)
GTCATTATTTCCACGTTGGAAGTTGTAGGGAAATGTCATGTTTCCTTTTATTTGTAAACT
AGTTGTACATAAATAGTAATAAATAAATATTGATACAATAAAATATTTACCTCATTGAAG
TGCAATTATAAAATATGTTATATAAGTGAAGAAGTTTTATACTGTTTACAGTACTATGAC
CTCTACTGAGTTTTTATCGGAACAAAATGAATTCTAAAAATTTTCCGAAAATACAGGATT
TTTTACTAAAGTATGTCTAGTAATAAGCATTACTAAATCAAAAGTGTAAAAAAAATGGAA
TTCGAAGAAGGCCTCATGTCAGACACGTGGACGGCGCCAAATGAACTCATGGAGATCTTC
TCCATGGACCAGGACTATTTGGATTTTCTCGAGGAGTCAATTCCAGATTTCAACATATGC
TCTGAAAATGTATCAGAAACCTCTAAAGCTATAAGTAGCACCTGTTCAGACAGTGGAATT
TCCAGTGATCATGCTGAATTCGATTTTGAACAGCAACTGTCCCCGTTTCTCATACAAAAC
TCGTGCGAGGAGGAACTGCCGGCTCCGATAGCCGACGGACCCACGAGCCCCAGCACCCAG
GATGTCGTCATCCGGGATTCGAATGATACGTCCAATAGCTCCACGGACCTCGCGGACGAC
GTCTTCGATATGCAGGACTTCGAGCAGAACGTCGTCCCCGGATTCATTAATGCGAATACA
TTCCACAGCCCGGGTAAGAACGGGCGAAAACGTCGCCCTTCAACGTCGTCGCTAAATGCC
GTCCAAACCAAACACCACAAGCCGACGATAAAGTTGCCCGGGACCACGCAAAAACCGCAG
CTAATCGTGACGGCCCAACCGCAGAAACCGGTCAAAGTGGCCAACATACAAGTACTGAAC
CCGCAGACTAAAGTCTATTCGAAACCGGTCGAATCAGTCGCGCCCCAGCGGCGAGTTATC
CGGGTGGCCCCGATGGCGGGAAATCCGCGCTCGATATTGTTGCCCGTCACGATTAAAGAC
ATGAAAGATTTGAAATCGATAAAGATTATAAACGCGGCAGACTTGAAGAACGCGTCGAAT
ATAAAGTTGGCGGCGGCGAATTTGTTATCGCAAAGCAAACTCAACGACTTGAAAGAATCC
AGAAATGAATACGAGTACGAACACAACAATAATTGCGATGACTCAGGAAGCGAACGCAGC
GACGACGACGACGACCACAAGGAGACTCAGGTCAGCGACGGTCGCAACGGGTACCCGCGC
CTCGTGCTAACCGCCGAGGAGCGCCGCCTCTTGGCGAAGGAGGGCATCACGCTACCCACC
AGCTATCCGCTCACGAAACACGAGGAACGGGAGCTGAAGAGGATCAGACGCAAAATCAGG
AACAAGATCTCAGCTCAGGACTCGAGGAAACGCAAGAAGGAATATGTCGATGGACTCGAA
GACAGGGTAAAACAGTGTACCGCAGAGAACCAGACGTTAATTAGGAGGATAAAAATACTG
CAGTCACAGAACCAGTCGCTGAGTGCTCAGTTGAAACGTTTACAGAACGTATTAAAGGGT
GCGAGTGGTAGCAGTACGAACAAGTCTGCCCAGCCGGCCACGTGTCTGCTAGTGCTGCTG
TTGTCCGTGGCGCTAGTGGCGCTGCCCTCCCTCCGCGACGAGGCCCCGCCCCGCGCCTCG
CCCGCCTCCCCCGCCGCGCCCGCCTCCCCCGCAGTCACGCGGGCTCTACTCTCCGCCACC
AACAAAATGACGTTGGATGAGACGGTGATCGACGATGGAGAGTTCAACATGGACGAGCTG
ATCACCTTCAACCGCCCGCACTCGGACCACGACTACCAGGTCGTCAAGAGCCTAGACACT
CACAAGGTTCTGCCAAACGGCTACGTCGACCTCCCCATAGACGAGGACTGGCCGCCTAAT
CTCAAGAAACGTATGAAAAAACTCGAATTCGACTACGAAGACGGCCGGGATTACCTAACG
CCCGTAGTCAAAGAGGAGAATTACGGCAGTTACAAGATCGAAGCGAAAATCAAACCGGAT
CTCACTGAGGATTTCTTGACGAACACACTGCTGTCCACGGGACGGAAATTAGGAGAATTG
TTCGACATTATGCCGCCGATACCCGTCAAAAACGAAGACATCGTCATTGAGGAGGTATCC
GACCACGAGACCAGAAACACGACCGAAGTCAGGAGTTTTGTTGTCAACGGCACCGCTAAT
AACTTTTAAATATACAATTATTTAATTCCTTTAAAAATTCCGTTTACTTTTTTTTTGTTA
CCTTTTAATAATAATTTTACTATTAGATTTGTTTCCTGAATATTTGTGTTTTTTTTATTT
GTGAAGACGATGTATGTGACTCATGATTCCATATTTTAAGATCAATTTTTATTTTAATAA
TTTTAGTCTTTTAGATTTTATGTGTTAGTGAGATTGTGAAGAATGATTATTACGTAAATT
AAGATTATAATTTTATATTAAATTACTATATGCGGAGAGTTTATAATTTATTTTTAAAAG
TCAAAATTAATATATATACAATCAATTTTTATATTTTTTACAGAGAAATTACACTTTCAC
TGTGCATGTCTATCTATAATTTTAAGCATTTTATTTTGGGTGCAATTACATTTTAGTTAC
AGATTTAATTGTTCTAGTAAAAGTATAGTTCTATCTCAATATTAGTTTTAGATTATTTTA
TATTATCTACTTACAGAGCGGACAGATCGGAAGAGCGTCG
(2740 bp)

- SilkBase 1999-2023 -