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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2251 A_BomoASG_c12997_g1_i1
744bp
FPKM:2.70 TPM:2.07
2252 A_BomoASG_c12998_g1_i1
442bp
 PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0015074 P DNA integration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.07 TPM:2.35
2253 A_BomoASG_c13000_g1_i1
239bp
 zinc_finger_with_UFM1-specific_peptidase_domain_protein_[Bombyx_mori]
FPKM:0.67 TPM:0.52
2254 A_BomoASG_c13002_g1_i1
264bp
FPKM:14.82 TPM:11.37
2255 A_BomoASG_c13003_g1_i1
1908bp
 microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008092 F cytoskeletal protein binding
GO:0030496 C midbody
FPKM:22.86 TPM:17.53
2256 A_BomoASG_c13005_g1_i1
267bp
 PREDICTED:_mucin-2-like_[Amyelois_transitella]
FPKM:2.06 TPM:1.58
2257 A_BomoASG_c13006_g1_i1
357bp
 modifier_of_mdg4,_partial_[Danaus_plexippus_plexippus]
FPKM:1.61 TPM:1.23
2258 A_BomoASG_c13006_g1_i2
227bp
 modifier_of_mdg4,_partial_[Danaus_plexippus_plexippus]
FPKM:8.10 TPM:6.21
2259 A_BomoASG_c1300_g1_i1
213bp
hypothetical_protein_[Mycobacterium_tuberculosis]
GO:0000166 F nucleotide binding
GO:0000932 C P-body
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005783 C endoplasmic reticulum
GO:0010494 C cytoplasmic stress granule
GO:0030529 C ribonucleoprotein complex
GO:0032197 P transposition, RNA-mediated
GO:0042802 F identical protein binding
FPKM:1.86 TPM:1.43
2260 A_BomoASG_c13010_g1_i1
361bp
FPKM:0.00 TPM:0.00
2261 A_BomoASG_c13010_g1_i2
577bp
FPKM:6.41 TPM:4.92
2262 A_BomoASG_c13011_g1_i1
486bp
 PREDICTED:_mucin-2-like_[Amyelois_transitella]
FPKM:1.24 TPM:0.95
2263 A_BomoASG_c13012_g1_i1
345bp
 proton-coupled_folate_transporter_isoform_X3_[Bombyx_mori]
GO:0005542 F folic acid binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:1.23 TPM:0.95
2264 A_BomoASG_c13013_g1_i1
1518bp
 protoheme_IX_farnesyltransferase,_mitochondrial_[Bombyx_mori]
GO:0000266 P mitochondrial fission
GO:0004129 F cytochrome-c oxidase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004659 F prenyltransferase activity
GO:0005739 C mitochondrion
GO:0006783 P heme biosynthetic process
GO:0006784 P heme A biosynthetic process
GO:0007005 P mitochondrion organization
GO:0008495 F protoheme IX farnesyltransferase activity
GO:0008535 P respiratory chain complex IV assembly
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0017004 P cytochrome complex assembly
GO:0018343 P protein farnesylation
GO:0031966 C mitochondrial membrane
GO:0045333 P cellular respiration
GO:0048034 P heme O biosynthetic process
GO:0070069 C cytochrome complex
GO:1902600 P proton transmembrane transport
FPKM:58.85 TPM:45.14
2265 A_BomoASG_c13014_g1_i1
1514bp
 Gag-like_protein_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
FPKM:1.90 TPM:1.45
2266 A_BomoASG_c13014_g1_i2
982bp
 Gag-like_protein_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
FPKM:1.38 TPM:1.06
2267 A_BomoASG_c13015_g1_i1
854bp
 polyribonucleotide_nucleotidyltransferase_1,_mitochondrial_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000957 P mitochondrial RNA catabolic process
GO:0000958 P mitochondrial mRNA catabolic process
GO:0000962 P positive regulation of mitochondrial RNA catabolic process
GO:0000964 P mitochondrial RNA 5'-end processing
GO:0000965 P mitochondrial RNA 3'-end processing
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004654 F polyribonucleotide nucleotidyltransferase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006401 P RNA catabolic process
GO:0006402 P mRNA catabolic process
GO:0006810 P transport
GO:0008266 F poly(U) RNA binding
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0034046 F poly(G) binding
GO:0034599 P cellular response to oxidative stress
GO:0035198 F miRNA binding
GO:0035458 P cellular response to interferon-beta
GO:0035927 P RNA import into mitochondrion
GO:0035928 P rRNA import into mitochondrion
GO:0043457 P regulation of cellular respiration
GO:0043631 P RNA polyadenylation
GO:0044822 F RNA binding
GO:0045025 C mitochondrial degradosome
GO:0045926 P negative regulation of growth
GO:0051260 P protein homooligomerization
GO:0061014 P positive regulation of mRNA catabolic process
GO:0070207 P protein homotrimerization
GO:0070584 P mitochondrion morphogenesis
GO:0071042 P nuclear polyadenylation-dependent mRNA catabolic process
GO:0071850 P regulation of cell cycle
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
GO:0097222 P mitochondrial mRNA polyadenylation
GO:2000627 P positive regulation of miRNA catabolic process
GO:2000772 P regulation of cellular senescence
FPKM:3.63 TPM:2.78
2268 A_BomoASG_c13017_g1_i1
2573bp
 DnaJ_(Hsp40)_homolog_9_[Bombyx_mori]
GO:0001671 F ATPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006457 P protein folding
GO:0016020 C membrane
GO:0031072 F heat shock protein binding
GO:0032781 P positive regulation of ATP-dependent activity
GO:0070062 C extracellular exosome
GO:0070389 P chaperone cofactor-dependent protein refolding
GO:1900034 P regulation of cellular response to heat
FPKM:78.17 TPM:59.96
2269 A_BomoASG_c13018_g1_i1
259bp
FPKM:1.11 TPM:0.85
2270 A_BomoASG_c13019_g1_i1
213bp
FPKM:3.43 TPM:2.63
2271 A_BomoASG_c13019_g1_i2
463bp
FPKM:1.78 TPM:1.36
2272 A_BomoASG_c1301_g1_i1
263bp
FPKM:2.67 TPM:2.05
2273 A_BomoASG_c13021_g1_i1
334bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.94 TPM:2.26
2274 A_BomoASG_c13021_g2_i1
202bp
FPKM:2.20 TPM:1.69
2275 A_BomoASG_c13023_g1_i1
253bp
FPKM:1.17 TPM:0.90
2276 A_BomoASG_c13024_g1_i1
519bp
 protein_KBP_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0006839 P mitochondrial transport
GO:0007399 P nervous system development
GO:0019894 F kinesin binding
FPKM:10.02 TPM:7.68
2277 A_BomoASG_c13025_g1_i1
799bp
FPKM:29.46 TPM:22.60
2278 A_BomoASG_c13026_g1_i1
297bp
FPKM:0.00 TPM:0.00
2279 A_BomoASG_c13026_g1_i2
348bp
FPKM:10.92 TPM:8.38
2280 A_BomoASG_c13027_g1_i1
477bp
 diptheria_toxin_resistance_protein_[Bombyx_mori]
GO:0017183 P peptidyl-diphthamide biosynthetic process from peptidyl-histidine
FPKM:2.37 TPM:1.82
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