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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2191 A_BomoASG_c12940_g1_i1
258bp
FPKM:2.79 TPM:2.14
2192 A_BomoASG_c12941_g1_i1
307bp
FPKM:3.07 TPM:2.36
2193 A_BomoASG_c12943_g1_i1
225bp
FPKM:2.38 TPM:1.83
2194 A_BomoASG_c12943_g1_i2
306bp
FPKM:4.25 TPM:3.26
2195 A_BomoASG_c12944_g1_i1
201bp
FPKM:10.05 TPM:7.71
2196 A_BomoASG_c12945_g1_i1
300bp
 PREDICTED:_uncharacterized_protein_LOC106142138_[Amyelois_transitella]
FPKM:20.09 TPM:15.41
2197 A_BomoASG_c12946_g1_i1
2155bp
 BWK-1-like_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0030054 C cell junction
FPKM:34.41 TPM:26.39
2198 A_BomoASG_c12947_g1_i1
423bp
 probable_chitinase_2_[Bombyx_mori]
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0008061 F chitin binding
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:3.29 TPM:2.52
2199 A_BomoASG_c12948_g1_i1
662bp
 type_I_inositol_3,4-bisphosphate_4-phosphatase_isoform_X2_[Bombyx_mori]
FPKM:3.14 TPM:2.41
2200 A_BomoASG_c12949_g1_i1
363bp
FPKM:7.89 TPM:6.05
2201 A_BomoASG_c1294_g1_i1
224bp
 LOW_QUALITY_PROTEIN:_chondroitin_sulfate_proteoglycan_4_[Bombyx_mori]
FPKM:2.41 TPM:1.85
2202 A_BomoASG_c12950_g1_i1
301bp
FPKM:2.40 TPM:1.84
2203 A_BomoASG_c12952_g1_i1
265bp
FPKM:1.05 TPM:0.80
2204 A_BomoASG_c12953_g1_i1
1022bp
 PREDICTED:_probable_dimethyladenosine_transferase_[Amyelois_transitella]
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005759 C mitochondrial matrix
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0052909 F 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity
FPKM:4.15 TPM:3.18
2205 A_BomoASG_c12954_g1_i1
292bp
 Bloom_syndrome_protein_homolog_isoform_X2_[Bombyx_mori]
FPKM:4.67 TPM:3.58
2206 A_BomoASG_c12955_g1_i1
1507bp
 mitochondrial_inner_membrane_protein_OXA1L_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005746 C mitochondrial respirasome
GO:0006461 P protein-containing complex assembly
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0032592 C integral component of mitochondrial membrane
GO:0032780 P negative regulation of ATP-dependent activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0033615 P mitochondrial proton-transporting ATP synthase complex assembly
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0051205 P protein insertion into membrane
GO:0051262 P protein tetramerization
GO:0051354 P negative regulation of oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0097031 P obsolete mitochondrial respiratory chain complex I biogenesis
GO:0097177 F mitochondrial ribosome binding
FPKM:21.51 TPM:16.50
2207 A_BomoASG_c12956_g1_i1
799bp
 nucleolar_phosphoprotein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0010923 P negative regulation of phosphatase activity
FPKM:51.77 TPM:39.71
2208 A_BomoASG_c12956_g1_i2
562bp
 nucleolar_phosphoprotein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000794 C condensed nuclear chromosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006461 P protein-containing complex assembly
GO:0009303 P rRNA transcription
GO:0010923 P negative regulation of phosphatase activity
GO:0016072 P rRNA metabolic process
GO:0044822 F RNA binding
FPKM:0.00 TPM:0.00
2209 A_BomoASG_c12957_g1_i1
4112bp
 uncharacterized_protein_LOC692518_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0017105 F acyl-CoA delta11-desaturase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:151.32 TPM:116.07
2210 A_BomoASG_c12958_g1_i1
232bp
FPKM:1.46 TPM:1.12
2211 A_BomoASG_c12959_g1_i1
1426bp
 ribosomal_RNA_processing_protein_1_homolog_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0005634 C nucleus
GO:0006364 P rRNA processing
GO:0016072 P rRNA metabolic process
GO:0030687 C preribosome, large subunit precursor
GO:0030688 C preribosome, small subunit precursor
FPKM:28.35 TPM:21.75
2212 A_BomoASG_c1295_g1_i1
371bp
FPKM:1.36 TPM:1.04
2213 A_BomoASG_c12961_g1_i1
1751bp
 dolichyl-diphosphooligosaccharide--protein_glycosyltransferase_subunit_1_[Bombyx_mori]
GO:0004579 F dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0042470 C melanosome
FPKM:161.96 TPM:124.23
2214 A_BomoASG_c12962_g1_i1
273bp
FPKM:0.00 TPM:0.00
2215 A_BomoASG_c12963_g1_i1
2348bp
 hexokinase_type_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001678 P cellular glucose homeostasis
GO:0004340 F glucokinase activity
GO:0004396 F hexokinase activity
GO:0005524 F ATP binding
GO:0005536 F glucose binding
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006000 P fructose metabolic process
GO:0006006 P glucose metabolic process
GO:0006013 P mannose metabolic process
GO:0006096 P glycolytic process
GO:0008865 F fructokinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019158 F mannokinase activity
GO:0019318 P hexose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0051156 P glucose 6-phosphate metabolic process
FPKM:291.56 TPM:223.64
2216 A_BomoASG_c12963_g1_i2
2385bp
 hexokinase_type_2_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001678 P cellular glucose homeostasis
GO:0004340 F glucokinase activity
GO:0004396 F hexokinase activity
GO:0005524 F ATP binding
GO:0005536 F glucose binding
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006000 P fructose metabolic process
GO:0006006 P glucose metabolic process
GO:0006013 P mannose metabolic process
GO:0006096 P glycolytic process
GO:0008865 F fructokinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019158 F mannokinase activity
GO:0019318 P hexose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0051156 P glucose 6-phosphate metabolic process
FPKM:48.57 TPM:37.26
2217 A_BomoASG_c12965_g1_i1
399bp
 PREDICTED:_uncharacterized_protein_LOC106126064_[Papilio_xuthus]
FPKM:2.16 TPM:1.65
2218 A_BomoASG_c12966_g1_i1
972bp
 protein_FAM32A-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
FPKM:42.82 TPM:32.84
2219 A_BomoASG_c12967_g1_i1
596bp
FPKM:1.60 TPM:1.23
2220 A_BomoASG_c12968_g1_i1
1546bp
 aminoacylase-1_isoform_X1_[Bombyx_mori]
GO:0004046 F aminoacylase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006520 P cellular amino acid metabolic process
GO:0008152 P metabolic process
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:60.36 TPM:46.30
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