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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c12953_g1_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_probable_dimethyladenosine_transferase_[Amyelois_transitella]
Ontology
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005759 C mitochondrial matrix
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0052909 F 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity
Transcript
Level		FPKM:4.15 TPM:3.18
ORF EntryO_BomoASG2246_3prime_partial:A_BomoASG_c12953_g1_i1
Sequence
(Nucleotide)
CTCAACTCGTGTGATTTTCTTCTTTTTATTTTGATAGTATTATACTTATACCATTAACCA
TTACGTTGTAAATCCATTTATTACTTTGTCAAACTATCGTGTGTCATTAAAAATGCCAAA
AATTAAGGCAGAAAAAAAAACGAGAATTCATAAAGAAATTGCTAAACAAGGTATTCAATT
TAACAAGGACTTCGGTCAACACATATTGAAGAATCCACTAATAATAACCTCTATGTTAGA
CAAATCTGGATTAAGGCCTACTGATGTAGCACTTGAGATTGGTCCTGGTACTGGCAATAT
GACAGTCAAATTGCTGGACAGAGTAAAAAAGGTATTAGCCTGTGAAATTGATACAAGATT
GGTTGCTGAACTTCAAAAACGTGTGCAAGGTACTCCTTATCAAGCAAAATTACAAATTTT
GGTTGGAGATGTTTTGAAAACAGAATTACCATTTTTTGATATATGTGTAGCAAATATTCC
ATATCAAATTAGTTCACCTTTAGTGTTCAAATTGCTGCTACACAGACCTTTCTTTAGGTG
TGCAGTGCTCATGTTTCAAAAGGAGTTTGCACAGAGATTAGTTGCAAAGCCTGGTGATAA
ATTGTACTGCAGACTGTCAATAAATACACAATTATTGGCTAGAGTTGATATGCTGATGAA
GGTTGGCAAGAACAATTTCAGACCACCACCCAAAGTAGAGTCTAGTGTTGTGAGAATAGA
ACCAAGAAATCCACCTCCGCCTATAAATTTTGTAGAATGGGATGGTTTGACTAGAATAGC
ATTTGTAAGAAAAAATAAAACACTCTCAGCTGCATTCAAACATGCAACCACAATGGCTGC
TTTGGAGAAAAATTACAGGGTCCATTGTTCTTTACACAATAAGGAAATCCCTGAAGATTT
TGATATTAAGCAAAAAGTACATGAAATATTGACATCCTGTGAAGCTGATCAAATGAGGGC
TAGAACAATGGATATTGATGACTTTATGAAGCTATTACATGCTTTTAATGCTAGATCGGA
AG
(1022 bp)

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